RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Gm11985A0A1B0GS61 206 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Slc16a2O70324 545 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Il4rP16382 810 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 PuraP42669 321 aaKnown RBP9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Setd4P58467 439 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mphosph8Q3TYA6 858 aaKnown RBP9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ccdc33Q3ULW6 985 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Phlda1Q62392 405 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Prr11Q8BHE0 368 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Sgpl1Q8R0X7 568 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 AclyQ91V92 1091 aaKnown RBP9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ears2Q9CXJ1 523 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Eif4e3Q9DBB5 207 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Sucla2Q9Z2I9 463 aa9.29□□□□□ -0.92
Trim39-205ENSMUST00000173369 Spocd1B1ASB6 936 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 PklrP53657 574 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Lpar1P61793 364 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Pfkfb1P70266 471 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Rit2P70425 217 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mcm6P97311 821 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Fdxacb1Q3UY23 622 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Znf652Q5DU09 608 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Kif5bQ61768 963 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ppp1r26Q6A025 1163 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Zdhhc14Q8BQQ1 489 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Rps6ka5Q8C050 863 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Pcdhb12Q91Y07 789 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 CtsqQ91ZF4 343 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Kremen1Q99N43 473 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Lysmd1Q9D0E3 226 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Q9D5Q8 446 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tmod3Q9JHJ0 352 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Dnajb2Q9QYI5 324 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Lrrc37aB1AWG4 3215 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Dhtkd1A2ATU0 921 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Gm6133B2RY53 190 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Glud1P26443 558 aaKnown RBP9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Clcn3P51791 818 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 SqleP52019 572 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ly9Q01965 654 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mark2Q05512 776 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mfhas1Q3V1N1 1048 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Exoc3Q6KAR6 755 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Plcb4Q91UZ1 1175 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 YwhabQ9CQV8 246 aaKnown RBP9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Scrn1Q9CZC8 414 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ftsj3Q9DBE9 838 aaKnown RBP9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tbx18Q9EPZ6 613 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ush1cQ9ES64 910 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Dapk3O54784 448 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Psmc2P46471 433 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cbx1P83917 185 aaKnown RBP9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 HmgcrQ01237 887 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 GscQ02591 256 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Psg29Q3URN6 468 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Kiaa1328Q6NZK5 612 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Rec8Q8C5S7 591 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Smoc2Q8CD91 447 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Wdr24Q8CFJ9 790 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Celf3Q8CIN6 465 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Champ1Q8K327 802 aaKnown RBP9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Yeats4Q9CR11 227 aaKnown RBP9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Snx10Q9CWT3 201 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tekt1Q9DAJ2 418 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 SelenooQ9DBC0 667 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Phtf1Q9QZ09 761 aa9.28□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ttll6A4Q9E8 822 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Bin1O08539 588 aaKnown RBP9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nr1i2O54915 431 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Fzd1O70421 642 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cyp2f2P33267 491 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 GaaP70699 953 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Slc9a2Q3ZAS0 814 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ppp2r5cQ60996 524 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Sycp1Q62209 993 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Drc7Q6V3W6 876 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Thap3Q8BJ25 218 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Enox2Q8R0Z2 598 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ifih1Q8R5F7 1025 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cep72Q9D3R3 646 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cep83Q9D5R3 692 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Wnt8bQ9WUD6 350 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Kcnh3Q9WVJ0 1095 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Myh9Q8VDD5 1960 aaKnown RBP9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Slc6a16A0A1L1SR47 742 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm12800B1AUV4 484 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Jakmip2D3YXK0 820 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Trim12cD3Z3L3 497 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Atp2b1G5E829 1220 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm12794L7MTS5 483 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Arhgap6O54834 987 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Got1P05201 413 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Btbd1P58544 488 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tarbp2P97473 365 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Kmt5aQ2YDW7 349 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 FcgrtQ61559 365 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ces1eQ64176 562 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ssh1Q76I79 1042 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nsun6Q7TS68 476 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nacc1Q7TSZ8 514 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 194 ms