RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Btbd18A0A0A6YY25 723 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Idh1O88844 414 aaKnown RBP10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Tal1P22091 329 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Klra9Q2TJJ8 266 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 CbarpQ66L44 698 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Lrig3Q6P1C6 1117 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 BcrQ6PAJ1 1270 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Ppp2r5aQ6PD03 486 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Pdzph1Q8BGR1 1238 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Ccdc28aQ8CEI3 192 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Ago4Q8CJF8 861 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Dnajc14Q921R4 703 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Spdl1Q923A2 608 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Arl2bpQ9D385 163 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Mzb1Q9D8I1 188 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Sertad2Q9JJG5 309 aa10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Usp14Q9JMA1 493 aaKnown RBP10.16□□□□□ -0.78
Usp28-201ENSMUST00000047349 Exoc4O35382 975 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 MybP06876 636 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 P4hbP09103 509 aaKnown RBP10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Rgl1Q60695 768 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Sycp1Q62209 993 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Fhod1Q6P9Q4 1197 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 F13a1Q8BH61 732 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Slc51aQ8R000 340 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Galnt15Q9D2N8 638 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 SyncQ9EPM5 470 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Trim10Q9WUH5 489 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Zfp213E9QAW0 468 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Gtpbp6Q3U6U5 514 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Srrm3Q80WV7 648 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Gdap1l1Q8VE33 370 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 PpanQ91YU8 470 aaKnown RBP10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Cd2bp2Q9CWK3 342 aaKnown RBP10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Arhgef7Q9ES28 862 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Slc12a7Q9WVL3 1083 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Tjp2Q9Z0U1 1167 aaKnown RBP10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Eddm13E9Q7F5 164 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Il13ra2O88786 383 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Gna15P30678 374 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 NfrkbQ6PIJ4 1296 aaKnown RBP10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Cyp26b1Q811W2 512 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Hook3Q8BUK6 718 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Acat1Q8QZT1 424 aa10.15□□□□□ -0.78
Usp28-201ENSMUST00000047349 Fam205a1D3YZF6 1314 aa10.15□□□□□ -0.79
Usp28-201ENSMUST00000047349 Cyp11b2P15539 500 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Erbb2P70424 1256 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Rit2P70425 217 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Fbln1Q08879 705 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Atp13a3Q5XF89 1219 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Ddx3xQ62167 662 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Insm1Q63ZV0 521 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Brd2Q7JJ13 798 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Actn1Q7TPR4 892 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Lrrc45Q8CIM1 670 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 NkapQ9D0F4 415 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Cfap57Q9D180 1249 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Serpinb3bQ9D1Q5 387 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Mxra8Q9DBV4 442 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Olr1Q9EQ09 363 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Fut8Q9WTS2 575 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Col1a1P11087 1453 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Gm38392E9Q2A2 434 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Tmem132dQ76HP3 1097 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Ccdc181Q80ZU5 509 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Arfgap2Q99K28 520 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Ergic2Q9CR89 377 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 4921524L21RikQ9D5T2 438 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Pja1O55176 578 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Lmnb1P14733 588 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Vwa3aQ3UVV9 1148 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Trim37Q6PCX9 961 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Fam193aQ8CGI1 1231 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Smc6Q924W5 1097 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Mettl16Q9CQG2 553 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Fyb2A2A995 729 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Gm14525B1AZA0 212 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Gm2012B1B0R1 212 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 AoahO35298 574 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Rfc1P35601 1131 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Fgfr4Q03142 799 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Mier3Q3UHF3 551 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Gm14819Q62478 212 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Tlr11Q6R5P0 926 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Sh3d21Q7TSG5 549 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Haus1Q8BHX1 278 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Zhx2Q8C0C0 836 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Atp5c1Q91VR2 298 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Gbp7Q91Z40 638 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Ctnnbl1Q9CWL8 563 aaKnown RBP10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Dydc1Q9D9T0 175 aa10.14□□□□□ -0.79
Usp28-201ENSMUST00000047349 Ppp2r5eQ61151 467 aa10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 Ehbp1Q69ZW3 1231 aa10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 Gm2163Q6PCY5 473 aa10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 Raver2Q7TPD6 673 aa10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 Gpr101Q80T62 511 aa10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 Ublcp1Q8BGR9 318 aa10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 Usp38Q8BW70 1042 aa10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 NkrfQ8BY02 690 aaKnown RBP10.13□□□□□ -0.79
Usp28-201ENSMUST00000047349 Iws1Q8C1D8 766 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms