RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Git1Q68FF6 770 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Zcwpw1Q6IR42 630 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 LdhdQ7TNG8 484 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 C2cd5Q7TPS5 1016 aaKnown RBP17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 BC048507Q80ZS7 89 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Zranb2Q9R020 330 aaKnown RBP17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tnni1Q9WUZ5 187 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Knl1Q66JQ7 1612 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Syngap1F6SEU4 1340 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Kcnh4A2A5F7 1018 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Sema3fO88632 785 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Sult1d1Q3UZZ6 295 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 TfrcQ62351 763 aaKnown RBP17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Rnf112Q96DY5 654 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Psma8Q9CWH6 250 aa17.83■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 DgkkE9Q7N4 1118 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 VdrP48281 422 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Sec31aQ3UPL0 1230 aaKnown RBP17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Scnn1aQ61180 699 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Arhgap29Q8CGF1 1266 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Sulf1Q8K007 870 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Mroh2aD3Z750 1679 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Kif23E9Q5G3 953 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Vmn2r71L7N2D8 855 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 DffaO54786 331 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ptk2P34152 1090 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Trim32Q8CH72 655 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Sertad1Q9JL10 236 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Large1Q9Z1M7 756 aa17.83■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Myo1eE9Q634 1107 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Orc4O88708 433 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Kpna2P52293 529 aaKnown RBP17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Sytl1Q99N80 567 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Mcl1P97287 331 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Map10Q8BJS7 891 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ppfia2Q8BSS9 1257 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Creld2Q9CYA0 350 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 C87977A2A958 498 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Carmil2Q3V3V9 1296 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Lrig2Q52KR2 1054 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ttc26Q8BS45 554 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Trerf1Q8BXJ2 1205 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Kiaa0319lQ8K135 1048 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ccdc65Q8VHI7 493 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Setd3Q91WC0 594 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Foxo4Q9WVH3 505 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Slc4a1P04919 929 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 S100a5P63084 93 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Luc7l3Q5SUF2 432 aaKnown RBP17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ireb2Q811J3 963 aaKnown RBP17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Hip1Q8VD75 1029 aaKnown RBP17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Rbp7Q9EPC5 134 aa17.82■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Tpp1O89023 562 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Krt10P02535 570 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 E2f8Q58FA4 860 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Serpina3bQ8BYY9 420 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Epc1Q8C9X6 813 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Nkiras1Q8CEC5 192 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 H6pdQ8CFX1 789 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Gins2Q9D600 185 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 SelenovD3YXG1 328 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Gngt2Q61017 69 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ppm1mQ8BU27 406 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Q8C5C9 218 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Cep57Q8CEE0 500 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Q8CEZ4 452 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Fam114a2Q8VE88 497 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Grin2dQ03391 1323 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Mylk3Q3UIZ8 795 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Cage1Q5IR70 849 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Avpr1aQ62463 423 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ppp1r16bQ8VHQ3 568 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Rrp1bQ91YK2 724 aaKnown RBP17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Trim7Q923T7 510 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Utp11Q9CZJ1 253 aaKnown RBP17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Gm45261A0A1B0GSP6 197 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 HdxQ14B70 692 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Brinp3Q499E0 766 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Rassf9Q8K342 435 aa17.81■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Cep85lA0A1W2P884 806 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ugt1a6bK9J7B2 531 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Slc3a2P10852 526 aaKnown RBP17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Palb2Q3U0P1 1104 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ugt1a6Q64435 531 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ugt1a7cQ6ZQM8 531 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Pak4Q8BTW9 593 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Zcchc18Q8VD24 393 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 ArpinQ9D0A3 226 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Stx1bP61264 288 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Fra10ac1Q8BP78 315 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Fsd1lQ8BYN5 507 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Slc12a6Q924N4 1150 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Orc3Q9JK30 715 aaKnown RBP17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Stag2O35638 1231 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Thumpd3P97770 505 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Kcnb1Q03717 857 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Lmntd2Q0VET5 664 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Akap4Q60662 849 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Tlr13Q6R5N8 991 aa17.8■□□□□ 0.44
Ubfd1-201ENSMUST00000033158 Ints9Q8K114 658 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms