RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 NfrkbQ6PIJ4 1296 aaKnown RBP13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Sdad1Q80UZ2 687 aaKnown RBP13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Scfd2Q8BTY8 684 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Yars2Q8BYL4 472 aaKnown RBP13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Parp10Q8CIE4 960 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Gdap1l1Q8VE33 370 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Nxnl2Q9D531 156 aa13.92□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Kcnu1O54982 1121 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Fgfr4Q03142 799 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Dcaf17Q3TUL7 519 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Rnf40Q3U319 1001 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Kdm7aQ3UWM4 940 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Exoc3Q6KAR6 755 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 BcrQ6PAJ1 1270 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Bola2Q8BGS2 86 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Gprc5cQ8K3J9 440 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Mageb16Q9CWV4 363 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 EmcnQ9R0H2 261 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Mrvi1Q9WUX5 899 aaKnown RBP13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Klhdc7aA2APT9 773 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Cd68P31996 326 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Cd37Q61470 281 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Ncapg2Q6DFV1 1138 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Slc17a8Q8BFU8 601 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Slc13a4Q8BZ82 625 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Trim47Q8C0E3 641 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Appl2Q8K3G9 662 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Scgb2b12S4R2L0 112 aa13.91□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Capn2O08529 700 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Tph1P17532 447 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 ArP19091 899 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Hoxc13P50207 328 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Pbxip1Q3TVI8 727 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Brd9Q3UQU0 596 aaKnown RBP13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Prr7Q3V0I2 269 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Fam20aQ8CID3 541 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Spata2Q8K004 515 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 PdxkQ8K183 312 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Matr3Q8K310 846 aaKnown RBP13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Gpsm2Q8VDU0 679 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Spdl1Q923A2 608 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Galnt15Q9D2N8 638 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Txnrd2Q9JLT4 524 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Fam129cD3YZB0 591 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Kcnj4P52189 445 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Sin3bQ62141 1098 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Cyp26b1Q811W2 512 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Scyl2Q8CFE4 930 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Cbwd1Q8VEH6 393 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Slc14a1Q8VHL0 384 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Kdm4bQ91VY5 1086 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Erlin1Q91X78 346 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 Tlr2Q9QUN7 784 aa13.9□□□□□ -0.18
Rnf4-201ENSMUST00000030992 1700016G14RikA0A286YCZ6 238 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Prss51A0A286YDY8 319 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fam71aB7XG49 585 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Zfp408H7BX78 710 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 P4hbP09103 509 aaKnown RBP13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Kifap3P70188 793 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gas7Q60780 421 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Mcf2lQ64096 1149 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fbxo10Q7TQF2 950 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ppm1eQ80TL0 749 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Enox2Q8R0Z2 598 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ttc5Q99LG4 440 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Q9D5Q8 446 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 PatjQ63ZW7 1834 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Trap1aP19473 224 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ddx3xQ62167 662 aaKnown RBP13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gm2163Q6PCY5 473 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Slc9c1Q6UJY2 1175 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cct8l1Q80YT3 562 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 F13a1Q8BH61 732 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fbxo28Q8BIG4 368 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 TxlnbQ8VBT1 685 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Calr3Q9D9Q6 380 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 SetQ9EQU5 289 aaKnown RBP13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Fyb2A2A995 729 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Olfr247E9PVJ7 320 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Magea4F2Z493 315 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Olfr819K7N727 320 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Guca2bO09051 106 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Atp13a4Q5XF90 1193 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Sh3gl2Q62420 352 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cfap100Q80VN0 613 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Kcnv2Q8CFS6 562 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ciapin1Q8WTY4 309 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tdrd3Q91W18 743 aaKnown RBP13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ube2sQ921J4 223 aa13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Prpf4Q9DAW6 521 aaKnown RBP13.89□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cntnap2Q9CPW0 1332 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Clrn2B2RVW2 232 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tcp10bE9PYJ0 438 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 D1Pas1P16381 660 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 GcP21614 476 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Lmnb2P21619 596 aaKnown RBP13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 GabpaQ00422 454 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ccdc84Q4VA36 332 aaKnown RBP13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Msantd2Q6NZR2 559 aa13.88□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Lrig3Q6P1C6 1117 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms