RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Adarb2Q9JI20 745 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Hmgb1P63158 215 aaKnown RBP13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 NfixP70257 488 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ano9P86044 747 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 BC051142Q3V0M8 400 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Fam183bQ5NC57 135 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Meis1Q60954 390 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 SrlQ7TQ48 910 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Rbm41Q8JZV4 413 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Pkn3Q8K045 878 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 DolkQ8R2Y3 534 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ccdc65Q8VHI7 493 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Adgra3Q7TT36 1310 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Gm45208A0A140LJ36 292 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Lrrfip1Q3UZ39 729 aaKnown RBP13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Igf2bp2Q5SF07 592 aaKnown RBP13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Herc4Q6PAV2 1057 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Armcx3Q8BHS6 379 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Tarsl2Q8BLY2 790 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Sh3rf3Q8C120 878 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Q8R1Y2 203 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ppp2r5dQ91V89 594 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Rrp15Q9CYX7 281 aaKnown RBP13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Nfs1Q9Z1J3 459 aa13.04□□□□□ -0.32
Ercc4-201ENSMUST00000023206 PurbO35295 324 aaKnown RBP13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Nol4P60954 483 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Creb1Q01147 341 aaKnown RBP13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Rrp36Q3UFY0 244 aaKnown RBP13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Tsg101Q61187 391 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Rcor2Q8C796 523 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 N4bp3Q8C7U1 537 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Fam228aQ8CDW1 299 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 P3h4Q8K2B0 443 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 OtoaQ8K561 1137 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Slc44a4Q91VA1 707 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Lman1Q9D0F3 517 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Cep72Q9D3R3 646 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 NapaQ9DB05 295 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Trmt112Q9DCG9 125 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Nav1Q8CH77 1875 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Kcnh4A2A5F7 1018 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Apol8A2VDH7 339 aaKnown RBP13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Fkbp1aP26883 108 aaKnown RBP13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Dlg1Q811D0 905 aaKnown RBP13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Rcn2Q8BP92 320 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Tmed5Q9CXE7 229 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Cdca7Q9D0M2 382 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Spata17Q9D552 379 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Lactbl1S4R213 581 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Akap11E9Q777 1895 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Nup62clA2AG10 272 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Bpifb4A2BGH0 617 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Tex13cD3YU32 604 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Stk10O55098 966 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 GnaqP21279 359 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Scg2Q03517 617 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Tmem35bQ3U0Y2 150 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Asap3Q5U464 904 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Nr2e1Q64104 385 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 N4bp1Q6A037 893 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ddx10Q80Y44 875 aaKnown RBP13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Dclk3Q8BWQ5 790 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Tekt2Q922G7 430 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Efhd1Q9D4J1 240 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Tbx18Q9EPZ6 613 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Scgb2b12S4R2L0 112 aa13.03□□□□□ -0.32
Ercc4-201ENSMUST00000023206 FocadA2AKG8 1798 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Gm13023A2A8N2 498 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Grik3B1AS29 919 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Oprl1P35377 367 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Alox15P39654 663 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Snai1Q02085 264 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 RalgdsQ03385 852 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Kctd1Q5M956 257 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Nsrp1Q5NCR9 542 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ccdc92bQ5SUE3 299 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Rexo1Q7TT28 1213 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Hirip3Q8BLH7 601 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ythdf3Q8BYK6 585 aaKnown RBP13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ints9Q8K114 658 aaKnown RBP13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Slc12a6Q924N4 1150 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Ears2Q9CXJ1 523 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Fsip1Q9D3V5 435 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Syce1Q9D495 329 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 March8Q9DBD2 286 aa13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Rfwd2Q9R1A8 733 aaKnown RBP13.02□□□□□ -0.32
Ercc4-201ENSMUST00000023206 Zfp105G3X9I0 524 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 GzmgP13366 248 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Gna11P21278 359 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Fdx1P46656 188 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Esyt3Q5DTI8 891 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 BC048507Q80ZS7 89 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Bicd1Q8BR07 835 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Kiaa1024Q8K3V7 917 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Krt79Q8VED5 531 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 RtcbQ99LF4 505 aaKnown RBP13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Ccdc89Q9DA73 370 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 CoasyQ9DBL7 563 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Cabp5Q9JLK3 173 aa13.02□□□□□ -0.33
Ercc4-201ENSMUST00000023206 Atp6v1g2Q9WTT4 118 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms