RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C SLP1Q12232 587 aa7.39□□□□□ -1.23
SOD2YHR008C NTO1Q12311 748 aa7.39□□□□□ -1.23
SOD2YHR008C CCW14O13547 238 aa7.38□□□□□ -1.23
SOD2YHR008C PET111P08468 800 aa7.38□□□□□ -1.23
SOD2YHR008C BAR1P12630 587 aa7.38□□□□□ -1.23
SOD2YHR008C MCK1P21965 375 aaKnown RBP7.38□□□□□ -1.23
SOD2YHR008C SYP1P25623 870 aaKnown RBP7.38□□□□□ -1.23
SOD2YHR008C PTH2P34222 208 aa7.38□□□□□ -1.23
SOD2YHR008C ATG7P38862 630 aa7.38□□□□□ -1.23
SOD2YHR008C OAF1P39720 1047 aaPredicted RBP7.38□□□□□ -1.23
SOD2YHR008C YIL012WP40551 113 aa7.38□□□□□ -1.23
SOD2YHR008C ECL1P48235 211 aa7.38□□□□□ -1.23
SOD2YHR008C RNR4P49723 345 aaKnown RBP7.38□□□□□ -1.23
SOD2YHR008C AIF1P52923 378 aa7.38□□□□□ -1.23
SOD2YHR008C TAF6P53040 516 aa7.38□□□□□ -1.23
SOD2YHR008C YPL071CQ02864 156 aa7.38□□□□□ -1.23
SOD2YHR008C RAF1Q06891 181 aa7.38□□□□□ -1.23
SOD2YHR008C YLR040CQ07988 224 aa7.38□□□□□ -1.23
SOD2YHR008C RPL15AP05748 204 aaKnown RBP7.37□□□□□ -1.23
SOD2YHR008C NCP1P16603 691 aaKnown RBP7.37□□□□□ -1.23
SOD2YHR008C UTP9P38882 575 aaKnown RBP7.37□□□□□ -1.23
SOD2YHR008C PEP8P40335 379 aa7.37□□□□□ -1.23
SOD2YHR008C RIC1P40395 1056 aa7.37□□□□□ -1.23
SOD2YHR008C MET18P40469 1032 aa7.37□□□□□ -1.23
SOD2YHR008C GPP1P41277 250 aaKnown RBP7.37□□□□□ -1.23
SOD2YHR008C YNL320WP42840 284 aa7.37□□□□□ -1.23
SOD2YHR008C RPS12P48589 143 aaKnown RBP7.37□□□□□ -1.23
SOD2YHR008C CDH1P53197 566 aa7.37□□□□□ -1.23
SOD2YHR008C RPL15BP54780 204 aaPredicted RBP7.37□□□□□ -1.23
SOD2YHR008C NCE101Q02820 53 aa7.37□□□□□ -1.23
SOD2YHR008C RRB1Q04225 511 aaKnown RBP7.37□□□□□ -1.23
SOD2YHR008C BUR2Q05949 395 aa7.37□□□□□ -1.23
SOD2YHR008C CBS1P14066 229 aa7.36□□□□□ -1.23
SOD2YHR008C NMT1P14743 455 aa7.36□□□□□ -1.23
SOD2YHR008C ROX1P25042 368 aa7.36□□□□□ -1.23
SOD2YHR008C RAD51P25454 400 aa7.36□□□□□ -1.23
SOD2YHR008C YER010CP40011 234 aa7.36□□□□□ -1.23
SOD2YHR008C YFL051CP43552 160 aa7.36□□□□□ -1.23
SOD2YHR008C MSY1P48527 492 aa7.36□□□□□ -1.23
SOD2YHR008C HOS2P53096 452 aaPredicted RBP7.36□□□□□ -1.23
SOD2YHR008C UBX4P54730 416 aa7.36□□□□□ -1.23
SOD2YHR008C IRC15Q02733 499 aa7.36□□□□□ -1.23
SOD2YHR008C GMC2Q06201 188 aa7.36□□□□□ -1.23
SOD2YHR008C PUN1Q06991 263 aa7.36□□□□□ -1.23
SOD2YHR008C DST1P07273 309 aa7.35□□□□□ -1.23
SOD2YHR008C PDX1P16451 410 aa7.35□□□□□ -1.23
SOD2YHR008C SAC7P17121 654 aa7.35□□□□□ -1.23
SOD2YHR008C MRPL25P23369 157 aa7.35□□□□□ -1.23
SOD2YHR008C OCA4P25366 362 aa7.35□□□□□ -1.23
SOD2YHR008C GTR2P53290 341 aa7.35□□□□□ -1.23
SOD2YHR008C LSC1P53598 329 aaKnown RBP7.35□□□□□ -1.23
SOD2YHR008C IST1P53843 298 aaPredicted RBP7.35□□□□□ -1.23
SOD2YHR008C SHR3Q02774 210 aa7.35□□□□□ -1.23
SOD2YHR008C ADE5,7P07244 802 aaKnown RBP7.34□□□□□ -1.23
SOD2YHR008C ALG7P07286 448 aa7.34□□□□□ -1.23
SOD2YHR008C KGD1P20967 1014 aaKnown RBP7.34□□□□□ -1.23
SOD2YHR008C CTS1P29029 562 aa7.34□□□□□ -1.23
SOD2YHR008C SSE1P32589 693 aaKnown RBP7.34□□□□□ -1.23
SOD2YHR008C AIM2P39721 246 aa7.34□□□□□ -1.23
SOD2YHR008C QRI1P43123 477 aaKnown RBP7.34□□□□□ -1.23
SOD2YHR008C RHO5P53879 331 aaKnown RBP7.34□□□□□ -1.23
SOD2YHR008C RNY1Q02933 434 aaKnown RBP7.34□□□□□ -1.23
SOD2YHR008C HNT3Q08702 217 aa7.34□□□□□ -1.23
SOD2YHR008C SWM1Q12379 170 aa7.34□□□□□ -1.23
SOD2YHR008C URA2P07259 2214 aaKnown RBP7.33□□□□□ -1.24
SOD2YHR008C MDN1Q12019 4910 aaKnown RBP7.33□□□□□ -1.24
SOD2YHR008C YPR096CO13587 100 aa7.33□□□□□ -1.24
SOD2YHR008C MOD5P07884 428 aa7.33□□□□□ -1.24
SOD2YHR008C COS2P0CX12 379 aa7.33□□□□□ -1.24
SOD2YHR008C COS3P0CX13 379 aa7.33□□□□□ -1.24
SOD2YHR008C CTA1P15202 515 aa7.33□□□□□ -1.24
SOD2YHR008C HIR2P32480 875 aa7.33□□□□□ -1.24
SOD2YHR008C SSO1P32867 290 aa7.33□□□□□ -1.24
SOD2YHR008C MRPL39P36533 70 aa7.33□□□□□ -1.24
SOD2YHR008C TSL1P38427 1098 aaKnown RBP7.33□□□□□ -1.24
SOD2YHR008C ECM10P39987 644 aa7.33□□□□□ -1.24
SOD2YHR008C MEP2P41948 499 aa7.33□□□□□ -1.24
SOD2YHR008C COS4P43542 379 aa7.33□□□□□ -1.24
SOD2YHR008C FMP32P43557 207 aa7.33□□□□□ -1.24
SOD2YHR008C BIT61P47041 543 aa7.33□□□□□ -1.24
SOD2YHR008C OGG1P53397 376 aaPredicted RBP7.33□□□□□ -1.24
SOD2YHR008C YNR068CP53754 272 aa7.33□□□□□ -1.24
SOD2YHR008C GOR1P53839 350 aa7.33□□□□□ -1.24
SOD2YHR008C ECM11Q04110 302 aa7.33□□□□□ -1.24
SOD2YHR008C MRPL1Q04599 285 aa7.33□□□□□ -1.24
SOD2YHR008C YMR310CQ04867 317 aaPredicted RBP7.33□□□□□ -1.24
SOD2YHR008C FMP40Q08968 688 aaPredicted RBP7.33□□□□□ -1.24
SOD2YHR008C ATG34Q12292 412 aa7.33□□□□□ -1.24
SOD2YHR008C DBP10Q12389 995 aaKnown RBP7.33□□□□□ -1.24
SOD2YHR008C COS111P38308 924 aa7.32□□□□□ -1.24
SOD2YHR008C PHO89P38361 574 aa7.32□□□□□ -1.24
SOD2YHR008C YHL012WP38709 493 aa7.32□□□□□ -1.24
SOD2YHR008C SCS2P40075 244 aaKnown RBP7.32□□□□□ -1.24
SOD2YHR008C ARF3P40994 183 aaRIP-Chip data7.32□□□□□ -1.24not detected
SOD2YHR008C YJR154WP47181 346 aa7.32□□□□□ -1.24
SOD2YHR008C ZIP2P53061 704 aa7.32□□□□□ -1.24
SOD2YHR008C BIO4P53630 237 aa7.32□□□□□ -1.24
SOD2YHR008C ASI1P54074 624 aa7.32□□□□□ -1.24
SOD2YHR008C VPS74Q06385 345 aa7.32□□□□□ -1.24
SOD2YHR008C YDL121CQ07541 149 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms