RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GPM6BQ13491 265 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 MARCH8Q5T0T0 291 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 TAF2Q6P1X5 1199 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 RBM28Q9NW13 759 aaKnown RBP19.11■□□□□ 0.65
PHGDH-213ENST00000641272 SLC9A2Q9UBY0 812 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 TRPC6Q9Y210 931 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 ADGRA3Q8IWK6 1321 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
PHGDH-213ENST00000641272 STXBP3O00186 592 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 ARP10275 920 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 CPA1P15085 419 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 RSPH3Q86UC2 560 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 TMEM192Q8IY95 271 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 KHSRPQ92945 711 aaKnown RBP eCLIP19.1■□□□□ 0.65
PHGDH-213ENST00000641272 MRPL38Q96DV4 380 aaKnown RBP19.1■□□□□ 0.65
PHGDH-213ENST00000641272 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 MXRA8Q9BRK3 442 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 SMARCAD1Q9H4L7 1026 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 KCNH7Q9NS40 1196 aa19.1■□□□□ 0.65
PHGDH-213ENST00000641272 MBLAC1A4D2B0 266 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-213ENST00000641272 INSRRP14616 1297 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 IBSPP21815 317 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-213ENST00000641272 FUT2Q10981 343 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 ITGB3BPQ13352 177 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-213ENST00000641272 FBXO47Q5MNV8 452 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 PPP1R18Q6NYC8 613 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 EP400NLQ6ZTU2 488 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 LINC01599Q8WXQ3 324 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 SAMD11Q96NU1 681 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 EPHX3Q9H6B9 360 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 AZI2Q9H6S1 392 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 RIC8AQ9NPQ8 531 aa19.09■□□□□ 0.65
PHGDH-213ENST00000641272 V9GY48 417 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-213ENST00000641272 H3BQ06 376 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-213ENST00000641272 CDC45O75419 566 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 CDC27P30260 824 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 CD52P31358 61 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 ACTR2P61160 394 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 MRPS6P82932 125 aaKnown RBP19.08■□□□□ 0.64
PHGDH-213ENST00000641272 EXOSC10Q01780 885 aaKnown RBP19.08■□□□□ 0.64
PHGDH-213ENST00000641272 PTPROQ16827 1216 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 TIGD5Q53EQ6 642 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 TCEAL5Q5H9L2 206 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 CENPQQ7L2Z9 268 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-213ENST00000641272 DHX32Q7L7V1 743 aaKnown RBP19.08■□□□□ 0.64
PHGDH-213ENST00000641272 FIBCD1Q8N539 461 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 IL17RAQ96F46 866 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 SDF4Q9BRK5 362 aa19.08■□□□□ 0.64
PHGDH-213ENST00000641272 AGO3Q9H9G7 860 aaKnown RBP19.08■□□□□ 0.64
PHGDH-213ENST00000641272 SMCO2A6NFE2 343 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 H3BNC9 293 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 IL9P15248 144 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 PLCB4Q15147 1175 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 TSHZ1Q6ZSZ6 1077 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 RPAINQ86UA6 219 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 BANK1Q8NDB2 785 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 AGO4Q9HCK5 861 aaKnown RBP19.07■□□□□ 0.64
PHGDH-213ENST00000641272 CD320Q9NPF0 282 aa19.07■□□□□ 0.64
PHGDH-213ENST00000641272 NFASCO94856 1347 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 FAM86C2PA6NEL3 165 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 FGD1P98174 961 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 CEP55Q53EZ4 464 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 JAKMIP3Q5VZ66 844 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-213ENST00000641272 RC3H2Q9HBD1 1191 aaKnown RBP19.06■□□□□ 0.64
PHGDH-213ENST00000641272 FAM217BQ9NTX9 383 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-213ENST00000641272 BARHL2Q9NY43 387 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 TRPV2Q9Y5S1 764 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 MYO7AQ13402 2215 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 TTC3P53804 2025 aa19.06■□□□□ 0.64
PHGDH-213ENST00000641272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-213ENST00000641272 RRN3P2A6NIE6 340 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 ADAMTS3O15072 1205 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 PPFIA3O75145 1194 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 LINC00271P0C7V0 271 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 ZNF76P36508 570 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 SREBF1P36956 1147 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 METAP2P50579 478 aaKnown RBP eCLIP19.05■□□□□ 0.641e-6■■□□□ 12.1
PHGDH-213ENST00000641272 APOBRQ0VD83 1088 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 LEXMQ3ZCV2 418 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 PTCRAQ6ISU1 281 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-213ENST00000641272 C1QTNF1Q9BXJ1 281 aa19.05■□□□□ 0.64
PHGDH-213ENST00000641272 NSUN3Q9H649 340 aaKnown RBP19.05■□□□□ 0.64
PHGDH-213ENST00000641272 hCG_1984214I3L0E3 225 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 M0QZ92 97 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 ENPP3O14638 875 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 BACH1O14867 736 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 GRM6O15303 877 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 MAFGO15525 162 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 CCNE2O96020 404 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 FOSP01100 380 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-213ENST00000641272 ADD1P35611 737 aaKnown RBP19.04■□□□□ 0.64
PHGDH-213ENST00000641272 CLK2P49760 499 aaKnown RBP19.04■□□□□ 0.64
PHGDH-213ENST00000641272 STAT5BP51692 787 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 AP3B2Q13367 1082 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 BTG3Q14201 252 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-213ENST00000641272 KRT32Q14532 448 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 PAN2Q504Q3 1202 aaKnown RBP19.04■□□□□ 0.64
PHGDH-213ENST00000641272 CCDC60Q8IWA6 550 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms