RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MAP3K10Q02779 954 aa18.83■□□□□ 0.6
PHGDH-211ENST00000641213 CXCL9Q07325 125 aa18.83■□□□□ 0.6
PHGDH-211ENST00000641213 PPP2R5CQ13362 524 aa18.83■□□□□ 0.6
PHGDH-211ENST00000641213 CTTNQ14247 550 aaKnown RBP18.83■□□□□ 0.6
PHGDH-211ENST00000641213 NBPF9Q3BBW0 867 aa18.83■□□□□ 0.6
PHGDH-211ENST00000641213 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-211ENST00000641213 DEF6Q9H4E7 631 aa18.83■□□□□ 0.6
PHGDH-211ENST00000641213 TUFT1Q9NNX1 390 aa18.83■□□□□ 0.6
PHGDH-211ENST00000641213 MACROD2A1Z1Q3 448 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 WNT10BO00744 389 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 SLITRK3O94933 977 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 MYBP10242 640 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 LDHDQ86WU2 507 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 GPIHBP1Q8IV16 184 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 LSM14BQ9BX40 385 aaKnown RBP18.82■□□□□ 0.6
PHGDH-211ENST00000641213 EHMT1Q9H9B1 1298 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 ARFGAP3Q9NP61 516 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 NLRC4Q9NPP4 1024 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 SAR1BQ9Y6B6 198 aa18.82■□□□□ 0.6
PHGDH-211ENST00000641213 CCDC151A5D8V7 595 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 AKR1B10O60218 316 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 USO1O60763 962 aaKnown RBP18.81■□□□□ 0.6
PHGDH-211ENST00000641213 PRPF6O94906 941 aaKnown RBP18.81■□□□□ 0.6
PHGDH-211ENST00000641213 TBC1D8O95759 1140 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 BRD3Q15059 726 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 ASTE1Q2TB18 679 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-211ENST00000641213 HGSNATQ68CP4 663 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 RINT1Q6NUQ1 792 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 PIGOQ8TEQ8 1089 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 SECISBP2LQ93073 1101 aaKnown RBP18.81■□□□□ 0.6
PHGDH-211ENST00000641213 DYDC2Q96IM9 177 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 CRACR2AQ9BSW2 395 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 BCAS3Q9H6U6 928 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 POLD4Q9HCU8 107 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 PDXKO00764 312 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 CHMP2AO43633 222 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 ASNSP08243 561 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 PLA2G4AP47712 749 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-211ENST00000641213 BMT2Q1RMZ1 405 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 CEP55Q53EZ4 464 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 TPH2Q8IWU9 490 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 SYN2Q92777 582 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-211ENST00000641213 PNKPQ96T60 521 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 NUCKS1Q9H1E3 243 aaKnown RBP18.81■□□□□ 0.6
PHGDH-211ENST00000641213 RAB21Q9UL25 225 aa18.81■□□□□ 0.6
PHGDH-211ENST00000641213 SSU72P8A0A1W2PR75 194 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 ANO9A1A5B4 782 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 TBCAO75347 108 aaKnown RBP18.8■□□□□ 0.6
PHGDH-211ENST00000641213 PTGER2P43116 358 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 PRELPP51888 382 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 POLR2FP61218 127 aaKnown RBP18.8■□□□□ 0.6
PHGDH-211ENST00000641213 KCNH2Q12809 1159 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 FRMD5Q7Z6J6 570 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 NOA1Q8NC60 698 aaKnown RBP18.8■□□□□ 0.6
PHGDH-211ENST00000641213 ZFP91Q96JP5 570 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-211ENST00000641213 CALUO43852 315 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-211ENST00000641213 TLR2O60603 784 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 GAS7O60861 476 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 SRGAP2O75044 1071 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 SASH3O75995 380 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 APBA1Q02410 837 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 SFMBT2Q5VUG0 894 aa18.8■□□□□ 0.6
PHGDH-211ENST00000641213 BRCA1P38398 1863 aaKnown RBP18.79■□□□□ 0.6
PHGDH-211ENST00000641213 ASTN1O14525 1302 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 SHTN1A0MZ66 631 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 ZBTB39O15060 712 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 RHOXF2BP0C7M4 288 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 ARP10275 920 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 GAP43P17677 238 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 INPP5BP32019 993 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 GABPB1Q06547 395 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-211ENST00000641213 C1orf186Q6ZWK4 172 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 RHOXF2Q9BQY4 288 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 DEFB129Q9H1M3 183 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 MYOZ2Q9NPC6 264 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 OLFML3Q9NRN5 406 aa18.79■□□□□ 0.6
PHGDH-211ENST00000641213 TYW1Q9NV66 732 aaKnown RBP18.79■□□□□ 0.6
PHGDH-211ENST00000641213 SCAF8Q9UPN6 1271 aaKnown RBP18.79■□□□□ 0.6
PHGDH-211ENST00000641213 SFI1A8K8P3 1242 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 PJA2O43164 708 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 GCNT3O95395 438 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 POLD1P28340 1107 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 EPS15P42566 896 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 DEFB132Q7Z7B7 95 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 TRIM58Q8NG06 486 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 HNRNPLLQ8WVV9 542 aaKnown RBP18.78■□□□□ 0.6
PHGDH-211ENST00000641213 AGBL1Q96MI9 1066 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 MMS19Q96T76 1030 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 ZNF577Q9BSK1 485 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 ARMCX3Q9UH62 379 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-211ENST00000641213 ZNF536O15090 1300 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 PHF20L1A8MW92 1017 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 SERPING1P05155 500 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 MAGEA1P43355 309 aa18.78■□□□□ 0.6
PHGDH-211ENST00000641213 SETQ01105 290 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-211ENST00000641213 GFPT1Q06210 699 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms