RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 SLFN13Q68D06 897 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 SH2D3CQ8N5H7 860 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 SYN2Q92777 582 aaPredicted RBP15.32■□□□□ 0.04
SPIN3-239ENST00000640463 ZIM3Q96PE6 472 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 NUCKS1Q9H1E3 243 aaKnown RBP15.32■□□□□ 0.04
SPIN3-239ENST00000640463 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 GRID2IPA4D2P6 1211 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 PPFIA4O75335 1185 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 KRT14P02533 472 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 HOXD13P35453 343 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 IRAK1P51617 712 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 ZNF571Q7Z3V5 609 aaPredicted RBP15.32■□□□□ 0.04
SPIN3-239ENST00000640463 KLHL7Q8IXQ5 586 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 RUFY1Q96T51 708 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 REEP2Q9BRK0 252 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 SMCHD1A6NHR9 2005 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 ARHGAP4P98171 946 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 GIT2Q14161 759 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 MEI1Q5TIA1 1274 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 TCERG1LQ5VWI1 586 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 EMBQ6PCB8 327 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 CYP2W1Q8TAV3 490 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 CRAMP1Q96RY5 1269 aa15.32■□□□□ 0.04
SPIN3-239ENST00000640463 DDTLA6NHG4 134 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 SFI1A8K8P3 1242 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 VGLL3A8MV65 326 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 G3V3G9 751 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 POLRMTO00411 1230 aaKnown RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 CLIC2O15247 247 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 HSF2BPO75031 334 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 GDF11O95390 407 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 KCNA1Q09470 495 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 SP8Q8IXZ3 490 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 CCDC43Q96MW1 224 aaKnown RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 SPAG5Q96R06 1193 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 AIPL1Q9NZN9 384 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 LTBP4Q8N2S1 1624 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 FAM86B1E9PN63 330 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 FAM86B2P0C5J1 330 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 HOXA13P31271 388 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 NOP2P46087 812 aaKnown RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 CASP4P49662 377 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 PPARDQ03181 441 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 SPIRE1Q08AE8 756 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 GJB7Q6PEY0 223 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 SH3GL2Q99962 352 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 DBNDD1Q9H9R9 158 aa15.31■□□□□ 0.04
SPIN3-239ENST00000640463 LUC7LQ9NQ29 371 aaKnown RBP15.31■□□□□ 0.04
SPIN3-239ENST00000640463 KCNK3O14649 394 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 TOM1O60784 492 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 SPATA31C1P0DKV0 1188 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 ADRA2BP18089 450 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 USP11P51784 963 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 GNGT1P63211 74 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 IRF2BP2Q7Z5L9 587 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 IFT20Q8IY31 132 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 CASKIN2Q8WXE0 1202 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 CAPS2Q9BXY5 557 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 ARMCX3Q9UH62 379 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-239ENST00000640463 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 AJAP1Q9UKB5 411 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-239ENST00000640463 PCDHGC5Q9Y5F6 944 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 UCHL3P15374 230 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 CCT5P48643 541 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 ATP1A2P50993 1020 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 RBM5P52756 815 aaKnown RBP eCLIP15.3■□□□□ 0.04
SPIN3-239ENST00000640463 ETNPPLQ8TBG4 499 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 FRMD3A2A2Y4 597 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 SHOX2O60902 331 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-239ENST00000640463 AKAP3O75969 853 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-239ENST00000640463 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
SPIN3-239ENST00000640463 CAVIN3Q969G5 261 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 INPP4AQ96PE3 977 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-239ENST00000640463 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 DNM3Q9UQ16 869 aa15.3■□□□□ 0.04
SPIN3-239ENST00000640463 GOLGA8KD6RF30 607 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 RAD51CO43502 376 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 OPA1O60313 960 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 POLD1P28340 1107 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 CRKP46108 304 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 PPFIA1Q13136 1202 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 KNOP1Q1ED39 458 aaKnown RBP15.29■□□□□ 0.04
SPIN3-239ENST00000640463 DPY19L2P1Q6NXN4 242 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 SIAH1Q8IUQ4 282 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 SLFN12Q8IYM2 578 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 TSPYL1Q9H0U9 437 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 BHMT2Q9H2M3 363 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 RGL1Q9NZL6 768 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 PON1P27169 355 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 RUSC1Q9BVN2 902 aa15.29■□□□□ 0.04
SPIN3-239ENST00000640463 PCDHB13Q9Y5F0 798 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms