RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PDGFDQ9GZP0 370 aaPredicted RBP7.34□□□□□ -1.23
CCDC7-216ENST00000640058 BARX1Q9HBU1 254 aaPredicted RBP7.34□□□□□ -1.23
CCDC7-216ENST00000640058 CDK11AQ9UQ88 783 aaPredicted RBP7.34□□□□□ -1.23
CCDC7-216ENST00000640058 PRAMEF25A6NGN4 478 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 IL18BPO95998 194 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 KNG1P01042 644 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 NFKB2Q00653 900 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 EFEMP1Q12805 493 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 SPATS1Q496A3 300 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 FIGNQ5HY92 759 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 CPZQ66K79 652 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 GPR155Q7Z3F1 870 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 KLHL36Q8N4N3 616 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 GSTCDQ8NEC7 633 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 IGDCC4Q8TDY8 1250 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 SCLYQ96I15 445 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 LOXL4Q96JB6 756 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 SMURF1Q9HCE7 757 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 KCND1Q9NSA2 647 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 ARHGAP28Q9P2N2 729 aa7.33□□□□□ -1.24
CCDC7-216ENST00000640058 GSTA4O15217 222 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 LAMTOR5O43504 91 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 B4GALT4O60513 344 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 EFCAB14O75071 495 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 KLHL18O94889 574 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 APPP05067 770 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 ZNF827Q17R98 1081 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 FSTL4Q6MZW2 842 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 HHIPL2Q6UWX4 724 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 FGD2Q7Z6J4 655 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 PLEKHH3Q7Z736 793 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 JMYQ8N9B5 988 aa7.32□□□□□ -1.24
CCDC7-216ENST00000640058 MAGEB10Q96LZ2 347 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-216ENST00000640058 RBM15Q96T37 977 aaKnown RBP eCLIP7.32□□□□□ -1.24
CCDC7-216ENST00000640058 SCDO00767 359 aa7.31□□□□□ -1.24
CCDC7-216ENST00000640058 MC4RP32245 332 aa7.31□□□□□ -1.24
CCDC7-216ENST00000640058 TRIM61Q5EBN2 209 aa7.31□□□□□ -1.24
CCDC7-216ENST00000640058 PKN3Q6P5Z2 889 aa7.31□□□□□ -1.24
CCDC7-216ENST00000640058 PTPN18Q99952 460 aa7.31□□□□□ -1.24
CCDC7-216ENST00000640058 JADE2Q9NQC1 790 aa7.31□□□□□ -1.24
CCDC7-216ENST00000640058 H0Y858 1186 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 C4BPAP04003 597 aaKnown RBP7.3□□□□□ -1.24
CCDC7-216ENST00000640058 ADRB1P08588 477 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 SEC23AQ15436 765 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 GLB1LQ6UWU2 654 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 ARHGEF18Q6ZSZ5 1173 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 Q6ZUG5 572 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 MRPL4Q9BYD3 311 aaKnown RBP7.3□□□□□ -1.24
CCDC7-216ENST00000640058 SMPD4Q9NXE4 827 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 PPP4R1LQ9P1A2 415 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 ADAM29Q9UKF5 820 aa7.3□□□□□ -1.24
CCDC7-216ENST00000640058 CLASP2O75122 1294 aaKnown RBP7.29□□□□□ -1.24
CCDC7-216ENST00000640058 RAPGEF3O95398 923 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 GJA4P35212 333 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 LACTBP83111 547 aaPredicted RBP7.29□□□□□ -1.24
CCDC7-216ENST00000640058 SURF1Q15526 300 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 NFE2L2Q16236 605 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 ABHD17CQ6PCB6 329 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 RALYLQ86SE5 291 aaKnown RBP7.29□□□□□ -1.24
CCDC7-216ENST00000640058 IGSF22Q8N9C0 903 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 MRFAP1L1Q96HT8 127 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 ZSWIM4Q9H7M6 989 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 KANSL2Q9H9L4 492 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 NCOA5Q9HCD5 579 aaKnown RBP7.29□□□□□ -1.24
CCDC7-216ENST00000640058 ST6GALNAC2Q9UJ37 374 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 CNOT11Q9UKZ1 510 aaKnown RBP7.29□□□□□ -1.24
CCDC7-216ENST00000640058 PTPN22Q9Y2R2 807 aa7.29□□□□□ -1.24
CCDC7-216ENST00000640058 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 TCRBV16S1A1N1A0A5B0 115 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 ESYT3A0FGR9 886 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 NPEPPSL1A6NEC2 478 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 CHGBP05060 677 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 PTGS1P23219 599 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 CSF2RBP32927 897 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 MAGEA10P43363 369 aaPredicted RBP7.28□□□□□ -1.24
CCDC7-216ENST00000640058 PPP2CBP62714 309 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 PPP2CAP67775 309 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 C8orf49Q96NF6 230 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 CELF4Q9BZC1 486 aaKnown RBP7.28□□□□□ -1.24
CCDC7-216ENST00000640058 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
CCDC7-216ENST00000640058 MMEP08473 750 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 ZNF888P0CJ79 500 aaPredicted RBP7.27□□□□□ -1.25
CCDC7-216ENST00000640058 AOAHP28039 575 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 ADCY8P40145 1251 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 WDR72Q3MJ13 1102 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 OVCH1Q7RTY7 1134 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 NOSTRINQ8IVI9 506 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 SSBP3Q9BWW4 388 aaPredicted RBP7.27□□□□□ -1.25
CCDC7-216ENST00000640058 INCENPQ9NQS7 918 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 UCKL1Q9NWZ5 548 aa7.27□□□□□ -1.25
CCDC7-216ENST00000640058 KCNA6P17658 529 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 EPHB4P54760 987 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 RRADP55042 308 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 ADAM17P78536 824 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 IL13RA1P78552 427 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 SQSTM1Q13501 440 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms