RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 RRN3P2A6NIE6 340 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 GRXCR1A8MXD5 290 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 M0R2N6 131 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 DHX15O43143 795 aaKnown RBP20.1■□□□□ 0.81
PTPN11-207ENST00000639857 STAT5BP51692 787 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 GRIK4Q16099 956 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 ZNF746Q6NUN9 644 aaPredicted RBP20.1■□□□□ 0.81
PTPN11-207ENST00000639857 SMAP1Q8IYB5 467 aaPredicted RBP20.1■□□□□ 0.81
PTPN11-207ENST00000639857 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 WASF1Q92558 559 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 FAM161BQ96MY7 647 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 CDX2Q99626 313 aaPredicted RBP20.1■□□□□ 0.81
PTPN11-207ENST00000639857 TCEAL9Q9UHQ7 104 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 TUBE1Q9UJT0 475 aa20.1■□□□□ 0.81
PTPN11-207ENST00000639857 MARK3P27448 753 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 PBX2P40425 430 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 KCNJ6P48051 423 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 KRT76Q01546 638 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 MBTPS1Q14703 1052 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 PRR16Q569H4 304 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 FAM26DQ5JW98 314 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 FAM160B1Q5W0V3 765 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 MOXD1Q6UVY6 613 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 GTF3C6Q969F1 213 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 LENG9Q96B70 501 aa20.09■□□□□ 0.81
PTPN11-207ENST00000639857 MYO9BQ13459 2157 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 SEC24BO95487 1268 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 CCNE2O96020 404 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 NEK4P51957 841 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 IKBKEQ14164 716 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 NPY5RQ15761 445 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 MIS18BP1Q6P0N0 1132 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 ABHD15Q6UXT9 468 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 RSPH3Q86UC2 560 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 PHF20Q9BVI0 1012 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 SLC28A3Q9HAS3 691 aa20.08■□□□□ 0.81
PTPN11-207ENST00000639857 WDR5P61964 334 aaKnown RBP20.07■□□□□ 0.8
PTPN11-207ENST00000639857 C8orf34Q49A92 452 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 PLEKHG4Q58EX7 1191 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 KRT25Q7Z3Z0 450 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 TBCKQ8TEA7 893 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 AIFM3Q96NN9 605 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 RIT2Q99578 217 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 TRPC6Q9Y210 931 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 COL1A2P08123 1366 aa20.07■□□□□ 0.8
PTPN11-207ENST00000639857 LOXHD1Q8IVV2 1947 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 CYP3A7-CYP3A51PA0A087WV96 503 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 DDX39AO00148 427 aaKnown RBP20.06■□□□□ 0.8
PTPN11-207ENST00000639857 CTDNEP1O95476 244 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 INSRRP14616 1297 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 CYP3A7P24462 503 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 PLCB4Q15147 1175 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 NONOQ15233 471 aaKnown RBP eCLIP20.06■□□□□ 0.8
PTPN11-207ENST00000639857 ME3Q16798 604 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 Q4G0T1 1027 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 MARCH8Q5T0T0 291 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 HERC6Q8IVU3 1022 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 APBB2Q92870 758 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 ZNF302Q9NR11 478 aa20.06■□□□□ 0.8
PTPN11-207ENST00000639857 ORC3Q9UBD5 711 aaPredicted RBP20.06■□□□□ 0.8
PTPN11-207ENST00000639857 YBX2Q9Y2T7 364 aaKnown RBP20.06■□□□□ 0.8
PTPN11-207ENST00000639857 POTEB3A0JP26 581 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 BACH1O14867 736 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 EDIL3O43854 480 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 HBP1O60381 514 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 MKRN4PQ13434 485 aaPredicted RBP20.05■□□□□ 0.8
PTPN11-207ENST00000639857 GRIN2CQ14957 1233 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 POTEBQ6S5H4 581 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 CCDC60Q8IWA6 550 aaPredicted RBP20.05■□□□□ 0.8
PTPN11-207ENST00000639857 ATP8B4Q8TF62 1192 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 SEPT8Q92599 483 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 MBOAT7Q96N66 472 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 NKX2-4Q9H2Z4 354 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 PCDHA10Q9Y5I2 948 aa20.05■□□□□ 0.8
PTPN11-207ENST00000639857 EVPLQ92817 2033 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 CHD9Q3L8U1 2897 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 WDR64B1ANS9 1081 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 MSH4O15457 936 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 PSAPP07602 524 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 CTSHP09668 335 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 RABGGTBP53611 331 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 PPP2R2DQ66LE6 453 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 RUFY4Q6ZNE9 571 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 MYLIPQ8WY64 445 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 SLC5A5Q92911 643 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 PCDHA2Q9Y5H9 948 aa20.04■□□□□ 0.8
PTPN11-207ENST00000639857 MAFBQ9Y5Q3 323 aaPredicted RBP20.04■□□□□ 0.8
PTPN11-207ENST00000639857 CCDC194A0A1B0GVG4 234 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 GAS7O60861 476 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 LARGE1O95461 756 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 FOSL2P15408 326 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 GCFC2P16383 781 aaKnown RBP20.03■□□□□ 0.8
PTPN11-207ENST00000639857 SFNP31947 248 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 PDXDC2PQ6P474 469 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 FAM43BQ6ZT52 329 aaPredicted RBP20.03■□□□□ 0.8
PTPN11-207ENST00000639857 IL27Q8NEV9 243 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 DBF4BQ8NFT6 615 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 RDM1Q8NG50 284 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 BBXQ8WY36 941 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms