RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 DNAAF5Q86Y56 855 aa11.03□□□□□ -0.64
SMARCA2-265ENST00000638139 SUGP1Q8IWZ8 645 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-265ENST00000638139 SCFD2Q8WU76 684 aa11.03□□□□□ -0.64
SMARCA2-265ENST00000638139 HDAC9Q9UKV0 1011 aa11.03□□□□□ -0.64
SMARCA2-265ENST00000638139 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-265ENST00000638139 ATXN2Q99700 1313 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-265ENST00000638139 HMGB1P1B2RPK0 211 aaPredicted RBP11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 PPP1R37O75864 691 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 MDH1P40925 334 aaKnown RBP11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 USP11P51784 963 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 CASP5P51878 434 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 ITGB3BPQ13352 177 aaPredicted RBP11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 PICALMQ13492 652 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 PTGISQ16647 500 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 CEP85LQ5SZL2 805 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 C10orf76Q5T2E6 689 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 NAA35Q5VZE5 725 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 FBXW10Q5XX13 1052 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 PBKQ96KB5 322 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 TMBIM4Q9HC24 238 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 PLCB1Q9NQ66 1216 aa11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.64
SMARCA2-265ENST00000638139 FRMD3A2A2Y4 597 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L10C9JJH3 530 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 CEP104O60308 925 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 MED24O75448 989 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 NR2F2P24468 414 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 STAT3P40763 770 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 HLTFQ14527 1009 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 PAXIP1Q6ZW49 1069 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 LRRC57Q8N9N7 239 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 TTLL1O95922 423 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 KRT18P05783 430 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 ZBTB48P10074 688 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 ATP2B4P23634 1241 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 GUCY2CP25092 1073 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 HNRNPH1P31943 449 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 HSD17B3P37058 310 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 SEC24CP53992 1094 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 SLC12A3P55017 1021 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 UAP1Q16222 522 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 PTPROQ16827 1216 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 PPP4R3CPQ6ZMV5 832 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 DDX42Q86XP3 938 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 EIF1ADQ8N9N8 165 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 ACTRT1Q8TDG2 376 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.02□□□□□ -0.655e-6■■■■□ 19.4
SMARCA2-265ENST00000638139 PAGR1Q9BTK6 254 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 NAGPAQ9UK23 515 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 DAGLAQ9Y4D2 1042 aa11.02□□□□□ -0.65
SMARCA2-265ENST00000638139 BTAF1O14981 1849 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 H0YGN5 161 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 ZBTB5O15062 677 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 UCHL3P15374 230 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 PON1P27169 355 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 FNTAP49354 379 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 LRIG3Q6UXM1 1119 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 FRMD5Q7Z6J6 570 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 NLRP14Q86W24 1093 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 SPATS2Q86XZ4 545 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 OTUD6BQ8N6M0 293 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 SPAG5Q96R06 1193 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 AP1M1Q9BXS5 423 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 DHX36Q9H2U1 1008 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 KCNMB3Q9NPA1 279 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 NFS1Q9Y697 457 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 POTEFA5A3E0 1075 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 KIAA0754O94854 1291 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 AFPP02771 609 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 POTEIP0CG38 1075 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 HOXD13P35453 343 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 CUL1Q13616 776 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 ALKBH5Q6P6C2 394 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 KCNV1Q6PIU1 500 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 USP17L6PQ6QN14 398 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 POTEEQ6S8J3 1075 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 KCTD1Q719H9 257 aa11.01□□□□□ -0.65
SMARCA2-265ENST00000638139 CNPY4Q8N129 248 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms