RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 NLRP9Q7RTR0 991 aa17.56■□□□□ 0.4
CACNA1A-258ENST00000638029 TSC22D3Q99576 134 aa17.56■□□□□ 0.4
CACNA1A-258ENST00000638029 SAR1BQ9Y6B6 198 aa17.56■□□□□ 0.4
CACNA1A-258ENST00000638029 NFKBIAP25963 317 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 STXBP2Q15833 593 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 CCDC92Q53HC0 331 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 KDELC2Q7Z4H8 507 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 ATP8A2Q9NTI2 1148 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 PLS3P13797 630 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 PPARGP37231 505 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 ARL4AP40617 200 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 RASSF7Q02833 373 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 TCP11X2Q5H9J9 407 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 ADALQ6DHV7 355 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 RFX8Q6ZV50 586 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 TNNQ9UQP3 1299 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 MEIS1O00470 390 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 IMPDH2P12268 514 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 SLC9A1P19634 815 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 OR6B3Q8NGW1 331 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 ZFP42Q96MM3 310 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 KCNJ18B7U540 433 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 GFAPP14136 432 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 SOX11P35716 441 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 IREB2P48200 963 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 MORC3Q14149 939 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 KCNJ12Q14500 433 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 PPARAQ07869 468 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 GRAMD1BQ3KR37 738 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 C8orf34Q49A92 452 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 FBXO41Q8TF61 875 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 NUMA1Q14980 2115 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 GTPBP6O43824 516 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-258ENST00000638029 GOLGA8KD6RF30 607 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 E7EWF7 191 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 MSH2P43246 934 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 KRT26Q7Z3Y9 468 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 COA7Q96BR5 231 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 NSFP46459 744 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 ARMC2Q8NEN0 867 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 PAWRQ96IZ0 340 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 ING2Q9H160 280 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 TRAF3IP3Q9Y228 551 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 CLIC2O15247 247 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 IRF1P10914 325 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 PTK2Q05397 1052 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 LRRC74AQ0VAA2 488 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 DDX42Q86XP3 938 aaKnown RBP eCLIP17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 TRIM58Q8NG06 486 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 RPF1Q9H9Y2 349 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 TCF3P15923 654 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 MED4Q9NPJ6 270 aa17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 EIF3CLB5ME19 914 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 SSTR3P32745 418 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-258ENST00000638029 H0YCG3 227 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 MCTP2Q6DN12 878 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 RRM2BQ7LG56 351 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 SLC7A3Q8WY07 619 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 PHF21AQ96BD5 680 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 ZSCAN10Q96SZ4 725 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 GTSE1Q9NYZ3 720 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 ZNF711Q9Y462 761 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 DCTN3O75935 186 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 HOMER3Q9NSC5 361 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 CHCHD3Q9NX63 227 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 TMCC1O94876 653 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 NACC1Q96RE7 527 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 GUCY2DQ02846 1103 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 OR6B2Q6IFH4 312 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 ANKRD49Q8WVL7 239 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 TXLNGQ9NUQ3 528 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 ADD3Q9UEY8 706 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 MAP3K19Q56UN5 1328 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 PDHA1P08559 390 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 IQCDQ96DY2 449 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 L3MBTL1Q9Y468 752 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 GOLGA8QA0A0J9YX86 632 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 ARHGAP10A1A4S6 786 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 GOLGA8OA6NCC3 632 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 GOLGA8NF8WBI6 632 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 MAPK4P31152 587 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 NME3Q13232 169 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 TRIM60Q495X7 471 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 KLHL29Q96CT2 875 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 CEP170P1Q96L14 293 aa17.53■□□□□ 0.4
CACNA1A-258ENST00000638029 SLC16A2P36021 539 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 KIAA1755Q5JYT7 1200 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 KRT40Q6A162 431 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 MAP7D3Q8IWC1 876 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 EGFL8Q99944 293 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 MAN1C1Q9NR34 630 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 FGFR1OP2Q9NVK5 253 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms