RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 RHOBTB3O94955 611 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 ALDH1A1P00352 501 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 CD44P16070 742 aaKnown RBP23.51■■□□□ 1.35
CLN8-213ENST00000637156 ACTR2P61160 394 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 UVSSAQ2YD98 709 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 ABHD15Q6UXT9 468 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 BPIFA3Q9BQP9 254 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 KIAA1217Q5T5P2 1943 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 SNAI1O95863 264 aaPredicted RBP23.51■■□□□ 1.35
CLN8-213ENST00000637156 SP4Q02446 784 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 UGCGQ16739 394 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 TMEM63BQ5T3F8 832 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 CCDC62Q6P9F0 684 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 KCNV1Q6PIU1 500 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 TCEAL9Q9UHQ7 104 aa23.51■■□□□ 1.35
CLN8-213ENST00000637156 NPHP3-ACAD11A0A0J9YXS1 232 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 PVALEFA0A1B0GWK0 134 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 PPP1R3GB7ZBB8 358 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 FARP2O94887 1054 aaPredicted RBP23.5■■□□□ 1.35
CLN8-213ENST00000637156 ATG7O95352 703 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 CTGFP29279 349 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 NEDD9Q14511 834 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 ZNF658Q5TYW1 1059 aaPredicted RBP23.5■■□□□ 1.35
CLN8-213ENST00000637156 TAPT1Q6NXT6 567 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 GPBP1Q86WP2 473 aa23.5■■□□□ 1.35
CLN8-213ENST00000637156 LYPLA2O95372 231 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 PSMC5P62195 406 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 UNC13DQ70J99 1090 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 GIMAP8Q8ND71 665 aaPredicted RBP23.49■■□□□ 1.35
CLN8-213ENST00000637156 USP6NLQ92738 828 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 KATNBL1Q9H079 304 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 BMP2KQ9NSY1 1161 aaPredicted RBP23.49■■□□□ 1.35
CLN8-213ENST00000637156 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.49■■□□□ 1.35
CLN8-213ENST00000637156 GJD2Q9UKL4 321 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 GDAQ9Y2T3 454 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 MAP2K5Q13163 448 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 RINT1Q6NUQ1 792 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 SWSAP1Q6NVH7 229 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 C4orf19Q8IY42 314 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 MED15Q96RN5 788 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 TINF2Q9BSI4 451 aa23.49■■□□□ 1.35
CLN8-213ENST00000637156 SYNGAP1Q96PV0 1343 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 PLXNB2O15031 1838 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 GGPS1O95749 300 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 RAD51AP2Q09MP3 1159 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 STK4Q13043 487 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 GIT2Q14161 759 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 REM2Q8IYK8 340 aaPredicted RBP23.48■■□□□ 1.35
CLN8-213ENST00000637156 HPS3Q969F9 1004 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 GABBR1Q9UBS5 961 aa23.48■■□□□ 1.35
CLN8-213ENST00000637156 PSAPP07602 524 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 IDEP14735 1019 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 HTRA3P83110 453 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 CACNB1Q02641 598 aaPredicted RBP23.47■■□□□ 1.35
CLN8-213ENST00000637156 EHHADHQ08426 723 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 NCAPHQ15003 741 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 METTL7BQ6UX53 244 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 C1orf186Q6ZWK4 172 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 AOPEPQ8N6M6 819 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 RUSC1Q9BVN2 902 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 SLC5A4Q9NY91 659 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 GSTTP1A0A1W2PQM5 241 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 BECN2A8MW95 431 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 HOXC6P09630 235 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 TXNP10599 105 aaKnown RBP23.47■■□□□ 1.35
CLN8-213ENST00000637156 CELF3Q5SZQ8 465 aaKnown RBP23.47■■□□□ 1.35
CLN8-213ENST00000637156 CCDC60Q8IWA6 550 aaPredicted RBP23.47■■□□□ 1.35
CLN8-213ENST00000637156 SCFD2Q8WU76 684 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 MLXIPQ9HAP2 919 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 MAPK8IP1Q9UQF2 711 aa23.47■■□□□ 1.35
CLN8-213ENST00000637156 ZNF862O60290 1169 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 YWHABP31946 246 aaKnown RBP23.46■■□□□ 1.35
CLN8-213ENST00000637156 PRCPP42785 496 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 MIS18BP1Q6P0N0 1132 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 TRMT1LQ7Z2T5 733 aaKnown RBP23.46■■□□□ 1.35
CLN8-213ENST00000637156 COPS5Q92905 334 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 POLD4Q9HCU8 107 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 VTA1Q9NP79 307 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 EXOC1Q9NV70 894 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 DACH1Q9UI36 760 aa23.46■■□□□ 1.35
CLN8-213ENST00000637156 RBM47A0AV96 593 aaKnown RBP23.45■■□□□ 1.35
CLN8-213ENST00000637156 TMEM150BA6NC51 233 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 AP5Z1O43299 807 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 STBD1O95210 358 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 TBC1D8O95759 1140 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 SUPT20HL2P0C7V6 817 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 ERCC5P28715 1186 aaPredicted RBP23.45■■□□□ 1.35
CLN8-213ENST00000637156 TTLL4Q14679 1199 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 CT47A1Q5JQC4 288 aaPredicted RBP23.45■■□□□ 1.35
CLN8-213ENST00000637156 CCDC47Q96A33 483 aaKnown RBP23.45■■□□□ 1.35
CLN8-213ENST00000637156 PANK4Q9NVE7 773 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 FLRT1Q9NZU1 646 aa23.45■■□□□ 1.35
CLN8-213ENST00000637156 LRRC37A2A6NM11 1700 aa23.45■■□□□ 1.34
CLN8-213ENST00000637156 DOCK3Q8IZD9 2030 aa23.45■■□□□ 1.34
CLN8-213ENST00000637156 IGKV6D-21A0A0A0MT36 114 aa23.45■■□□□ 1.34
CLN8-213ENST00000637156 FRMD3A2A2Y4 597 aa23.45■■□□□ 1.34
CLN8-213ENST00000637156 TNPO2O14787 897 aaKnown RBP23.45■■□□□ 1.34
CLN8-213ENST00000637156 IKBKBO14920 756 aa23.45■■□□□ 1.34
CLN8-213ENST00000637156 PTGS1P23219 599 aa23.45■■□□□ 1.34
CLN8-213ENST00000637156 VEGFBP49765 207 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms