RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 GLG1Q92896 1179 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 FERMT2Q96AC1 680 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 GLT1D1Q96MS3 346 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 RAB34Q9BZG1 259 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 SMARCAD1Q9H4L7 1026 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 AZI2Q9H6S1 392 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 VWA3AA6NCI4 1184 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 H3BRB1 525 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 SPTLC2O15270 562 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 NCLP19338 710 aaKnown RBP17.98■□□□□ 0.47
CLN6-216ENST00000636876 PSEN2P49810 448 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 STAT5BP51692 787 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 PLPPR4Q7Z2D5 763 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 UBE2Q1Q7Z7E8 422 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 PAWRQ96IZ0 340 aaKnown RBP17.98■□□□□ 0.47
CLN6-216ENST00000636876 TUT1Q9H6E5 874 aaKnown RBP17.98■□□□□ 0.47
CLN6-216ENST00000636876 ZNF302Q9NR11 478 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 GABBR1Q9UBS5 961 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 LRWD1Q9UFC0 647 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 FBXO2Q9UK22 296 aaPredicted RBP17.98■□□□□ 0.47
CLN6-216ENST00000636876 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
CLN6-216ENST00000636876 SRPRBQ9Y5M8 271 aaKnown RBP17.98■□□□□ 0.47
CLN6-216ENST00000636876 WDR81Q562E7 1941 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 IGSF9BQ9UPX0 1349 aa17.98■□□□□ 0.47
CLN6-216ENST00000636876 HAS3O00219 553 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 PSMC6P62333 389 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 MFSD10Q14728 455 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 UGCGQ16739 394 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 PDXDC2PQ6P474 469 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 NECAB2Q7Z6G3 386 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 NEK9Q8TD19 979 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 KCNG4Q8TDN1 519 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 VTI1AQ96AJ9 217 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 EIF2AK1Q9BQI3 630 aaKnown RBP17.97■□□□□ 0.47
CLN6-216ENST00000636876 KATNAL1Q9BW62 490 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 SENP6Q9GZR1 1112 aaPredicted RBP17.97■□□□□ 0.47
CLN6-216ENST00000636876 C11orf49Q9H6J7 331 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 STARD7Q9NQZ5 370 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 ERAP1Q9NZ08 941 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 RCOR1Q9UKL0 485 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 MAFBQ9Y5Q3 323 aaPredicted RBP17.97■□□□□ 0.47
CLN6-216ENST00000636876 TCHHQ07283 1943 aa17.97■□□□□ 0.47
CLN6-216ENST00000636876 MYH9P35579 1960 aaKnown RBP17.97■□□□□ 0.47
CLN6-216ENST00000636876 PPP6R2O75170 966 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 P4HBP07237 508 aaKnown RBP17.96■□□□□ 0.47
CLN6-216ENST00000636876 LONP1P36776 959 aaKnown RBP17.96■□□□□ 0.47
CLN6-216ENST00000636876 SLC26A2P50443 739 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 GRIN1Q05586 938 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 KIAA0753Q2KHM9 967 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 KRI1Q8N9T8 703 aaKnown RBP17.96■□□□□ 0.47
CLN6-216ENST00000636876 ERMNQ8TAM6 284 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 ATP6V0A1Q93050 837 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 DYDC2Q96IM9 177 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 RGL1Q9NZL6 768 aa17.96■□□□□ 0.47
CLN6-216ENST00000636876 GRIN2DO15399 1336 aa17.96■□□□□ 0.46
CLN6-216ENST00000636876 A0A0U1RQG5 324 aaPredicted RBP17.95■□□□□ 0.46
CLN6-216ENST00000636876 PP2D1A8MPX8 630 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 ZNF862O60290 1169 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 MARK3P27448 753 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 QARSP47897 775 aaKnown RBP17.95■□□□□ 0.46
CLN6-216ENST00000636876 CHMP4BP1P59074 171 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 PSMC5P62195 406 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 CYP4A11Q02928 519 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 NBPF20Q3BBV1 942 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 BANK1Q8NDB2 785 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 LEO1Q8WVC0 666 aaPredicted RBP17.95■□□□□ 0.46
CLN6-216ENST00000636876 SPATA32Q96LK8 384 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 AK8Q96MA6 479 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 HSD17B14Q9BPX1 270 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 POLR3CQ9BUI4 534 aaPredicted RBP17.95■□□□□ 0.46
CLN6-216ENST00000636876 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
CLN6-216ENST00000636876 PCDH10Q9P2E7 1040 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 STK24Q9Y6E0 443 aa17.95■□□□□ 0.46
CLN6-216ENST00000636876 DKC1O60832 514 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLN6-216ENST00000636876 SLITRK3O94933 977 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 ATP4AP20648 1035 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 PRKCEQ02156 737 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 CTTNQ14247 550 aaKnown RBP17.94■□□□□ 0.46
CLN6-216ENST00000636876 PLCB4Q15147 1175 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 HAUS3Q68CZ6 603 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 CKAP2LQ8IYA6 745 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 SLC43A3Q8NBI5 491 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 SNX29Q8TEQ0 813 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 TNPO1Q92973 898 aaKnown RBP17.94■□□□□ 0.46
CLN6-216ENST00000636876 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 LXNQ9BS40 222 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 CSRNP2Q9H175 543 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 RNPEPQ9H4A4 650 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 ZSWIM4Q9H7M6 989 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 TUFT1Q9NNX1 390 aa17.94■□□□□ 0.46
CLN6-216ENST00000636876 POTEB3A0JP26 581 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 ARVCFO00192 962 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 CUTAO60888 179 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 MED24O75448 989 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 SPATA31C1P0DKV0 1188 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 RPA1P27694 616 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 CDC25AP30304 524 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms