RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CETN3O15182 167 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 CYP3A7P24462 503 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 HSPA9P38646 679 aaKnown RBP15.96■□□□□ 0.15
CLN6-215ENST00000636674 DPP8Q6V1X1 898 aaPredicted RBP15.96■□□□□ 0.15
CLN6-215ENST00000636674 FRMD5Q7Z6J6 570 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 GPBP1Q86WP2 473 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 FAM133AQ8N9E0 248 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 CASKIN2Q8WXE0 1202 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 RPGRQ92834 1020 aaKnown RBP15.96■□□□□ 0.15
CLN6-215ENST00000636674 TRAF3IP3Q9Y228 551 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 SUGT1Q9Y2Z0 365 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 FAM153BP0C7A2 387 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 PRKCIP41743 596 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 USP11P51784 963 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 SLC12A3P55017 1021 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 IFI16Q16666 785 aaKnown RBP15.95■□□□□ 0.14
CLN6-215ENST00000636674 FAM153CQ494X1 144 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 SPATS2Q86XZ4 545 aaKnown RBP15.95■□□□□ 0.14
CLN6-215ENST00000636674 PBKQ96KB5 322 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 CALR3Q96L12 384 aaKnown RBP15.95■□□□□ 0.14
CLN6-215ENST00000636674 KRT12Q99456 494 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 EHD4Q9H223 541 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 PSTPIP2Q9H939 334 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 ADAMTS1Q9UHI8 967 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 FAM153AQ9UHL3 310 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 FBXL5Q9UKA1 691 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 NENFQ9UMX5 172 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 KIAA1024Q9UPX6 916 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 POTEB3A0JP26 581 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 ZSCAN5CA6NGD5 496 aaPredicted RBP15.95■□□□□ 0.14
CLN6-215ENST00000636674 POTECB2RU33 542 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 MARCH6O60337 910 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 RFC4P35249 363 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 KCNH2Q12809 1159 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 ADAM9Q13443 819 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 HERC4Q5GLZ8 1057 aaPredicted RBP15.95■□□□□ 0.14
CLN6-215ENST00000636674 PRR5LQ6MZQ0 368 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 POTEBQ6S5H4 581 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 IRF2BP2Q7Z5L9 587 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 NELFCDQ8IXH7 590 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 ACTRT1Q8TDG2 376 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 PACSIN1Q9BY11 444 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 ISCUQ9H1K1 167 aa15.95■□□□□ 0.14
CLN6-215ENST00000636674 KRT14P02533 472 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 SSBP05455 408 aaKnown RBP eCLIP15.94■□□□□ 0.14
CLN6-215ENST00000636674 ZBTB48P10074 688 aaPredicted RBP15.94■□□□□ 0.14
CLN6-215ENST00000636674 EPS15P42566 896 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 LRIG3Q6UXM1 1119 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 SLFN12Q8IYM2 578 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 LRRC57Q8N9N7 239 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 SCFD2Q8WU76 684 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 TAF4BQ92750 862 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 MXD3Q9BW11 206 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
CLN6-215ENST00000636674 DHX36Q9H2U1 1008 aaKnown RBP15.94■□□□□ 0.14
CLN6-215ENST00000636674 TAF1DQ9H5J8 278 aaPredicted RBP15.94■□□□□ 0.14
CLN6-215ENST00000636674 SERPINB13Q9UIV8 391 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 SRCAPQ6ZRS2 3230 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 VGLL3A8MV65 326 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 HMGB1P1B2RPK0 211 aaPredicted RBP15.94■□□□□ 0.14
CLN6-215ENST00000636674 RAD51CO43502 376 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 KIF4AO95239 1232 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 CUL1Q13616 776 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 RPS6KA1Q15418 735 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 ARSHQ5FYA8 562 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 B4GALNT4Q76KP1 1039 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 EPM2AIP1Q7L775 607 aaPredicted RBP15.94■□□□□ 0.14
CLN6-215ENST00000636674 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.94■□□□□ 0.14
CLN6-215ENST00000636674 TBC1D7Q9P0N9 293 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 HDAC9Q9UKV0 1011 aa15.94■□□□□ 0.14
CLN6-215ENST00000636674 ESYT3A0FGR9 886 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 ANKRD65E5RJM6 399 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 AFPP02771 609 aaKnown RBP15.93■□□□□ 0.14
CLN6-215ENST00000636674 NR2F2P24468 414 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 SHMT1P34896 483 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 PTK2Q05397 1052 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 SPIRE1Q08AE8 756 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 PDCLQ13371 301 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 BMT2Q1RMZ1 405 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 TRAPPC3LQ5T215 181 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 TTBK2Q6IQ55 1244 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 CLEC10AQ8IUN9 316 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 TBC1D16Q8TBP0 767 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 CRYGNQ8WXF5 182 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 IFT81Q8WYA0 676 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 GJA10Q969M2 543 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 ATP6V1G3Q96LB4 118 aa15.93■□□□□ 0.14
CLN6-215ENST00000636674 A0A0A6YYK5 440 aaPredicted RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 USP17L10C9JJH3 530 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 TBX3O15119 743 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 MED24O75448 989 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 BBOX1O75936 387 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 UCHL3P15374 230 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 NR1D1P20393 614 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 ECHS1P30084 290 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 EIF6P56537 245 aaKnown RBP15.92■□□□□ 0.14
CLN6-215ENST00000636674 AP3B2Q13367 1082 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 MCTP2Q6DN12 878 aa15.92■□□□□ 0.14
CLN6-215ENST00000636674 ZNF571Q7Z3V5 609 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms