RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 ZNF460Q14592 562 aa9.34□□□□□ -0.91
SMARCA2-239ENST00000635388 HDGFL2Q7Z4V5 671 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-239ENST00000635388 NLRP10Q86W26 655 aa9.34□□□□□ -0.91
SMARCA2-239ENST00000635388 SPC25Q9HBM1 224 aa9.34□□□□□ -0.91
SMARCA2-239ENST00000635388 KAT6BQ8WYB5 2073 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 A0A1W2PQ45 241 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 A0A1W2PQY0 241 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 LRP8Q14114 963 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 HSF5Q4G112 596 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 LRRTM3Q86VH5 581 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 Q8N1Y9 231 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 ANKS4BQ8N8V4 417 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 PUS7Q96PZ0 661 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 TARS2Q9BW92 718 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 SLC12A5Q9H2X9 1139 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 MBNL3Q9NUK0 354 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 PCDHA8Q9Y5H6 950 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 TNPO3Q9Y5L0 923 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 LRRC37A3O60309 1634 aa9.33□□□□□ -0.92
SMARCA2-239ENST00000635388 SPATA31A1Q5TZJ5 1347 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 PPP1R11O60927 126 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 MYCLP1P12525 358 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 NCLP19338 710 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 EVA1CP58658 441 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 KRT27Q7Z3Y8 459 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 RNF180Q86T96 592 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 PDZD8Q8NEN9 1154 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 PCMTD2Q9NV79 361 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 PPARGC1AQ9UBK2 798 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 PCDHA2Q9Y5H9 948 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 AATKQ6ZMQ8 1374 aa9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 FAM208AQ9UK61 1670 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-239ENST00000635388 OVOS2A0A0J9YW53 1432 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 BLMP54132 1417 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 OVOS2Q6IE36 1432 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 SBF2Q86WG5 1849 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 PDE8AO60658 829 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 WNT11O96014 354 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 ASLP04424 464 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 RNASE1P07998 156 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 POU3F2P20265 443 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 STAT3P40763 770 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 HK2P52789 917 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 TMF1P82094 1093 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 GUCY1A3Q02108 690 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 ZMYM1Q5SVZ6 1142 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 ABHD17CQ6PCB6 329 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 CEP128Q6ZU80 1094 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 KRT26Q7Z3Y9 468 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 MTDHQ86UE4 582 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 NME9Q86XW9 330 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 KCNH5Q8NCM2 988 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 NLGN2Q8NFZ4 835 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 MAGEB10Q96LZ2 347 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 PLCD4Q9BRC7 762 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 TIMM13Q9Y5L4 95 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 ANKRD36BQ8N2N9 1353 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 CRB1P82279 1406 aa9.31□□□□□ -0.92
SMARCA2-239ENST00000635388 WNT9AO14904 365 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 NRDCO43847 1150 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 NPHS1O60500 1241 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 HPXP02790 462 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 IGFALSP35858 605 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 CORO7P57737 925 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 RTP1P59025 263 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 ERVFC1P60507 584 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 PLCL1Q15111 1095 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 NR0B2Q15466 257 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 PTPROQ16827 1216 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 KIZQ2M2Z5 673 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 AGBL5Q8NDL9 886 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 DDX1Q92499 740 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 MTA3Q9BTC8 594 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 FBLN5Q9UBX5 448 aa9.3□□□□□ -0.92
SMARCA2-239ENST00000635388 RGPD2P0DJD1 1756 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 ANKRD26Q9UPS8 1709 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 HYAL3O43820 417 aaPredicted RBP9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 NAT1P18440 290 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 POU3F3P20264 500 aaPredicted RBP9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 GDNFP39905 211 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 BCL6P41182 706 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 CHRNEQ04844 493 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 TIGD5Q53EQ6 642 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 ARHGEF25Q86VW2 580 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 TCP11L2Q8N4U5 519 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 PCDH19Q8TAB3 1148 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 PI4K2BQ8TCG2 481 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 ASIC4Q96FT7 647 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 BRINP2Q9C0B6 783 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 IMPACTQ9P2X3 320 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 GULP1Q9UBP9 304 aa9.29□□□□□ -0.92
SMARCA2-239ENST00000635388 MYO1BO43795 1136 aa9.28□□□□□ -0.92
SMARCA2-239ENST00000635388 OPA1O60313 960 aa9.28□□□□□ -0.92
SMARCA2-239ENST00000635388 CKMP06732 381 aa9.28□□□□□ -0.92
SMARCA2-239ENST00000635388 MSL3P1P0C860 447 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms