RNA–Protein interactions for RNA: ENST00000632315.1

SVIL-213, Transcript of supervillin, humanhuman

TSL 5

Gene SVIL, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-213ENST00000632315 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.42
SVIL-213ENST00000632315 IFT88Q13099 833 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
SVIL-213ENST00000632315 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 RUBCNQ92622 972 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 HAS1Q92839 578 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 CCT8L2Q96SF2 557 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 DDX47Q9H0S4 455 aaKnown RBP12.42□□□□□ -0.42
SVIL-213ENST00000632315 EPN3Q9H201 632 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 NEUROG2Q9H2A3 272 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 KIAA1024Q9UPX6 916 aa12.42□□□□□ -0.42
SVIL-213ENST00000632315 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
SVIL-213ENST00000632315 PPP1R37O75864 691 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 PDHBP11177 359 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
SVIL-213ENST00000632315 TMOD1P28289 359 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 PTK2Q05397 1052 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 PTGISQ16647 500 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 CDAN1Q8IWY9 1227 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 NEDD1Q8NHV4 660 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 ATP6V1G3Q96LB4 118 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 BCAS3Q9H6U6 928 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 LRRC4CQ9HCJ2 640 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 RIC8AQ9NPQ8 531 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 POTECB2RU33 542 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 MEFVO15553 781 aaPredicted RBP12.41□□□□□ -0.42
SVIL-213ENST00000632315 RAD17O75943 681 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 EPS15P42566 896 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 ASIC2Q16515 512 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 MCTP2Q6DN12 878 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 WDR66Q8TBY9 1149 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 DDX25Q9UHL0 483 aaKnown RBP12.41□□□□□ -0.42
SVIL-213ENST00000632315 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
SVIL-213ENST00000632315 TMCO5BA8MYB1 307 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 ITGA4P13612 1032 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 STAT3P40763 770 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 MDH1P40925 334 aaKnown RBP12.4□□□□□ -0.42
SVIL-213ENST00000632315 CASP5P51878 434 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 KCNH2Q12809 1159 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 ADAM9Q13443 819 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 RPS6KA1Q15418 735 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 TMEM119Q4V9L6 283 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 B4GALNT4Q76KP1 1039 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 ZNF571Q7Z3V5 609 aaPredicted RBP12.4□□□□□ -0.42
SVIL-213ENST00000632315 NLRP14Q86W24 1093 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 SUGP1Q8IWZ8 645 aaKnown RBP12.4□□□□□ -0.42
SVIL-213ENST00000632315 MYCBPAPQ8TBZ2 947 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 TAF4BQ92750 862 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 PCDHGC5Q9Y5F6 944 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 ROBO3Q96MS0 1386 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 PPP1R11O60927 126 aaPredicted RBP12.4□□□□□ -0.42
SVIL-213ENST00000632315 HSD17B3P37058 310 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 FNTAP49354 379 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 ITGB3BPQ13352 177 aaPredicted RBP12.4□□□□□ -0.42
SVIL-213ENST00000632315 UAP1Q16222 522 aaPredicted RBP12.4□□□□□ -0.42
SVIL-213ENST00000632315 TRIM59Q8IWR1 403 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 SCFD1Q8WVM8 642 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 RAB34Q9BZG1 259 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 ABCB11O95342 1321 aa12.4□□□□□ -0.42
SVIL-213ENST00000632315 CLRN2A0PK11 232 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 ADRA2BP18089 450 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 ECHS1P30084 290 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 RHBDL3P58872 404 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.43
SVIL-213ENST00000632315 CHADLQ6NUI6 762 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 GJB7Q6PEY0 223 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 GPBP1Q86WP2 473 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 TRIM31Q9BZY9 425 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.43
SVIL-213ENST00000632315 RIOX1Q9H6W3 641 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 USP40Q9NVE5 1235 aa12.4□□□□□ -0.43
SVIL-213ENST00000632315 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 DCDC2CA8MYV0 355 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 PDIA5Q14554 519 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
SVIL-213ENST00000632315 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 UBLCP1Q8WVY7 318 aaPredicted RBP12.39□□□□□ -0.43
SVIL-213ENST00000632315 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
SVIL-213ENST00000632315 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 GANQ9H2C0 597 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 ZNF277Q9NRM2 450 aaPredicted RBP12.39□□□□□ -0.43
SVIL-213ENST00000632315 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 UBR3Q6ZT12 1888 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 USP17L15C9J2P7 530 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 USP17L13C9JLJ4 530 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 USP17L11C9JVI0 530 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
SVIL-213ENST00000632315 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms