RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ITGB1P05556 798 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 DNAJB1P25685 340 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 GRIK4Q16099 956 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 XRRA1Q6P2D8 792 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 SUGP1Q8IWZ8 645 aaKnown RBP23.2■■□□□ 1.3
TARDBP-228ENST00000629725 CMTR2Q8IYT2 770 aaKnown RBP23.2■■□□□ 1.3
TARDBP-228ENST00000629725 EFHBQ8N7U6 833 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 SMRP1Q8NCR6 262 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 SMARCC2Q8TAQ2 1214 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 SPPL3Q8TCT6 385 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 SNX27Q96L92 541 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 ERAP1Q9NZ08 941 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 CLEC1BQ9P126 229 aa23.2■■□□□ 1.3
TARDBP-228ENST00000629725 ERICH2A1L162 156 aa23.19■■□□□ 1.3
TARDBP-228ENST00000629725 MBLAC1A4D2B0 266 aaPredicted RBP23.19■■□□□ 1.3
TARDBP-228ENST00000629725 IFIT3O14879 490 aaKnown RBP23.19■■□□□ 1.3
TARDBP-228ENST00000629725 MARK3P27448 753 aa23.19■■□□□ 1.3
TARDBP-228ENST00000629725 COASYQ13057 564 aa23.19■■□□□ 1.3
TARDBP-228ENST00000629725 ADGRD2Q7Z7M1 963 aa23.19■■□□□ 1.3
TARDBP-228ENST00000629725 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
TARDBP-228ENST00000629725 PIBF1Q8WXW3 757 aa23.19■■□□□ 1.3
TARDBP-228ENST00000629725 CUL5Q93034 780 aa23.19■■□□□ 1.3
TARDBP-228ENST00000629725 AGO3Q9H9G7 860 aaKnown RBP23.19■■□□□ 1.3
TARDBP-228ENST00000629725 PLXNA4Q9HCM2 1894 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 LOC730098B7Z3J9 87 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 CD52P31358 61 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 ZXDAP98168 799 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 TROAPQ12815 778 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 MARCH8Q5T0T0 291 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 USP17L6PQ6QN14 398 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 SMC5Q8IY18 1101 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 KLHL23Q8NBE8 558 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 POF1BQ8WVV4 589 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 LINC01599Q8WXQ3 324 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 SEPT1Q8WYJ6 367 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 FTHL17Q9BXU8 183 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 DMDP11532 3685 aa23.18■■□□□ 1.3
TARDBP-228ENST00000629725 ATP9AO75110 1047 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 RPLP2P05387 115 aaKnown RBP23.17■■□□□ 1.3
TARDBP-228ENST00000629725 NRIP1P48552 1158 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 MRPS6P82932 125 aaKnown RBP23.17■■□□□ 1.3
TARDBP-228ENST00000629725 RBM23Q86U06 439 aaKnown RBP23.17■■□□□ 1.3
TARDBP-228ENST00000629725 NPAS4Q8IUM7 802 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 CRIPAKQ8N1N5 446 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 GLG1Q92896 1179 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 CDHR1Q96JP9 859 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 SENP2Q9HC62 589 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 KMT2EQ8IZD2 1858 aa23.17■■□□□ 1.3
TARDBP-228ENST00000629725 ZDBF2Q9HCK1 2354 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 GSTTP1A0A1W2PQM5 241 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 PIK3CDO00329 1044 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 MEIS2O14770 477 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 STAG3L1P0CL83 205 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 KCNA2P16389 499 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 IGBP1P78318 339 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 CBX2Q14781 532 aaPredicted RBP23.16■■□□□ 1.3
TARDBP-228ENST00000629725 WTAPQ15007 396 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 PAN2Q504Q3 1202 aaKnown RBP23.16■■□□□ 1.3
TARDBP-228ENST00000629725 IER5Q5VY09 327 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 RTN4RL1Q86UN2 441 aaPredicted RBP23.16■■□□□ 1.3
TARDBP-228ENST00000629725 GPRASP2Q96D09 838 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 SMARCAD1Q9H4L7 1026 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 BARX2Q9UMQ3 279 aaPredicted RBP23.16■■□□□ 1.3
TARDBP-228ENST00000629725 SQORQ9Y6N5 450 aa23.16■■□□□ 1.3
TARDBP-228ENST00000629725 ST18O60284 1047 aa23.15■■□□□ 1.3
TARDBP-228ENST00000629725 GLP2RO95838 553 aa23.15■■□□□ 1.3
TARDBP-228ENST00000629725 TCF15Q12870 199 aa23.15■■□□□ 1.3
TARDBP-228ENST00000629725 SART3Q15020 963 aaKnown RBP23.15■■□□□ 1.3
TARDBP-228ENST00000629725 CATIPQ7Z7H3 387 aa23.15■■□□□ 1.3
TARDBP-228ENST00000629725 FBXL6Q8N531 539 aa23.15■■□□□ 1.3
TARDBP-228ENST00000629725 FAM49AQ9H0Q0 323 aaPredicted RBP23.15■■□□□ 1.3
TARDBP-228ENST00000629725 IL25Q9H293 177 aa23.15■■□□□ 1.3
TARDBP-228ENST00000629725 RWDD1Q9H446 243 aaPredicted RBP23.15■■□□□ 1.3
TARDBP-228ENST00000629725 USP15Q9Y4E8 981 aaPredicted RBP23.15■■□□□ 1.3
TARDBP-228ENST00000629725 M0QZ92 97 aa23.14■■□□□ 1.29
TARDBP-228ENST00000629725 PHF7Q9BWX1 381 aaPredicted RBP23.14■■□□□ 1.29
TARDBP-228ENST00000629725 PADI3Q9ULW8 664 aa23.14■■□□□ 1.29
TARDBP-228ENST00000629725 RRN3P2A6NIE6 340 aa23.13■■□□□ 1.29
TARDBP-228ENST00000629725 SCG2P13521 617 aa23.13■■□□□ 1.29
TARDBP-228ENST00000629725 NUCB1Q02818 461 aa23.13■■□□□ 1.29
TARDBP-228ENST00000629725 SIGLEC14Q08ET2 396 aa23.13■■□□□ 1.29
TARDBP-228ENST00000629725 RALYLQ86SE5 291 aaKnown RBP23.13■■□□□ 1.29
TARDBP-228ENST00000629725 ZBTB10Q96DT7 871 aa23.13■■□□□ 1.29
TARDBP-228ENST00000629725 RRP36Q96EU6 259 aaKnown RBP23.13■■□□□ 1.29
TARDBP-228ENST00000629725 RPGRIP1Q96KN7 1286 aa23.13■■□□□ 1.29
TARDBP-228ENST00000629725 TLE6Q9H808 572 aa23.13■■□□□ 1.29
TARDBP-228ENST00000629725 U3KPZ7 1027 aaPredicted RBP23.13■■□□□ 1.29
TARDBP-228ENST00000629725 PPFIA3O75145 1194 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 CYP21A2P08686 494 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 INSRRP14616 1297 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 ITGB5P18084 799 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 TMEM62Q0P6H9 643 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 PAK2Q13177 524 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 MTMR1Q13613 665 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 MICAL1Q8TDZ2 1067 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 SPZ1Q9BXG8 430 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 PKD2L1Q9P0L9 805 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 SEC63Q9UGP8 760 aaKnown RBP23.12■■□□□ 1.29
TARDBP-228ENST00000629725 LRFN2Q9ULH4 789 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 PCDHGC5Q9Y5F6 944 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms