RNA–Protein interactions for RNA: ENST00000629343.2

TCF4-267, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-267	ENST00000629343	FAM126B	Q8IXS8	530 aa		11.16	□□□□□ -0.62
TCF4-267	ENST00000629343	TRPV6	Q9H1D0	765 aa		11.16	□□□□□ -0.62
TCF4-267	ENST00000629343	ERAP1	Q9NZ08	941 aa		11.16	□□□□□ -0.62
TCF4-267	ENST00000629343	CLIC4	Q9Y696	253 aa		11.16	□□□□□ -0.62
TCF4-267	ENST00000629343	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.16	□□□□□ -0.62
TCF4-267	ENST00000629343	EMSY	Q7Z589	1322 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	LAD1	O00515	517 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	MARCH6	O60337	910 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	ABCB7	O75027	752 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	F13A1	P00488	732 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	OR52Z1	P0C646	297 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	SPATA31C1	P0DKV0	1188 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	PRPH	P41219	470 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	TEC	P42680	631 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	SLC26A2	P50443	739 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	FXR2	P51116	673 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	JAK3	P52333	1124 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	ZNF200	P98182	395 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	ATP2C1	P98194	919 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	SF3A1	Q15459	793 aa	Known RBP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	MARCH8	Q5T0T0	291 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	GDF6	Q6KF10	455 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	MIER3	Q7Z3K6	550 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	DPF3	Q92784	378 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	GLG1	Q92896	1179 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	USP28	Q96RU2	1077 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	HTATIP2	Q9BUP3	242 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	KATNAL1	Q9BW62	490 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	ZNF302	Q9NR11	478 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	RGL1	Q9NZL6	768 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	TFIP11	Q9UBB9	837 aa	Known RBP	11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	GABBR1	Q9UBS5	961 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	GTF2IRD1	Q9UHL9	959 aa		11.15	□□□□□ -0.62
TCF4-267	ENST00000629343	TRIM43B	A6NCK2	446 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	ZBTB42	B2RXF5	422 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	CHMP2A	O43633	222 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	B4GALT4	O60513	344 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	P4HB	P07237	508 aa	Known RBP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	SMIM10L2A	P0DMW4	78 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	SMIM10L2B	P0DMW5	78 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	INSRR	P14616	1297 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	SLC39A14	Q15043	492 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	UGCG	Q16739	394 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	PDXDC2P	Q6P474	469 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	SH3RF1	Q7Z6J0	888 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	C7orf31	Q8N865	590 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	IGSF22	Q8N9C0	903 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	ATP8B4	Q8TF62	1192 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	CEP89	Q96ST8	783 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	NIFK	Q9BYG3	293 aa	Known RBP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	AZI2	Q9H6S1	392 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	TRMT13	Q9NUP7	481 aa	Known RBP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	SETD4	Q9NVD3	440 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	SAMM50	Q9Y512	469 aa		11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.14	□□□□□ -0.63
TCF4-267	ENST00000629343	POTEB3	A0JP26	581 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	DCDC2C	A8MYV0	355 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	BACH1	O14867	736 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	ZBTB39	O15060	712 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	KIAA0355	O15063	1070 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	HBP1	O60381	514 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	EVI5	O60447	810 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	PQBP1	O60828	265 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	LYPLA2	O95372	231 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	XRCC6	P12956	609 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	ITGB8	P26012	769 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	MARK3	P27448	753 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	QARS	P47897	775 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	NASP	P49321	788 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	CHMP4BP1	P59074	171 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	PSMC5	P62195	406 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	MLLT1	Q03111	559 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	TARBP2	Q15633	366 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	FAM160B1	Q5W0V3	765 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	POTEB	Q6S5H4	581 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	DTHD1	Q6ZMT9	781 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	CATSPER3	Q86XQ3	398 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	C4orf19	Q8IY42	314 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	BBX	Q8WY36	941 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	DYDC2	Q96IM9	177 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	MMTAG2	Q9BU76	263 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	NRBP2	Q9NSY0	501 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	TBX21	Q9UL17	535 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	ZNF215	Q9UL58	517 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	ATP11B	Q9Y2G3	1177 aa		11.13	□□□□□ -0.63
TCF4-267	ENST00000629343	NRCAM	Q92823	1304 aa		11.12	□□□□□ -0.63
TCF4-267	ENST00000629343		A0A087WWV3	80 aa		11.12	□□□□□ -0.63
TCF4-267	ENST00000629343	POTEM	A6NI47	508 aa		11.12	□□□□□ -0.63
TCF4-267	ENST00000629343	RRN3P2	A6NIE6	340 aa		11.12	□□□□□ -0.63
TCF4-267	ENST00000629343	TREH	O43280	583 aa		11.12	□□□□□ -0.63
TCF4-267	ENST00000629343	BMP15	O95972	392 aa		11.12	□□□□□ -0.63
TCF4-267	ENST00000629343	CDC25A	P30304	524 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms