RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 NOVA1P51513 510 aaKnown RBP7.24□□□□□ -1.25
LINC00649-220ENST00000628906 RARS2Q5T160 578 aaKnown RBP7.24□□□□□ -1.25
LINC00649-220ENST00000628906 MAMSTRQ6ZN01 415 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 C12orf76Q8N812 135 aaPredicted RBP7.24□□□□□ -1.25
LINC00649-220ENST00000628906 RSAD2Q8WXG1 361 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 KIFC2Q96AC6 838 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 CLDN23Q96B33 292 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 TRERF1Q96PN7 1200 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 ALG1Q9BT22 464 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 KATNAL1Q9BW62 490 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 USP44Q9H0E7 712 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 SLC2A4RGQ9NR83 387 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 RNF146Q9NTX7 359 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 TMEM260Q9NX78 707 aa7.24□□□□□ -1.25
LINC00649-220ENST00000628906 ADD3Q9UEY8 706 aaKnown RBP7.24□□□□□ -1.25
LINC00649-220ENST00000628906 KIAA1671Q9BY89 1806 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 SHROOM3Q8TF72 1996 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 F5H6K3 240 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 TREHO43280 583 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 F2P00734 622 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 CYP7A1P22680 504 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 ALDH5A1P51649 535 aaPredicted RBP7.23□□□□□ -1.25
LINC00649-220ENST00000628906 KLRC3Q07444 240 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 MFSD10Q14728 455 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 SF3A2Q15428 464 aaKnown RBP7.23□□□□□ -1.25
LINC00649-220ENST00000628906 PTPN14Q15678 1187 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 DGKDQ16760 1214 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 KIAA0753Q2KHM9 967 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 FAM26DQ5JW98 314 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 PLPP4Q5VZY2 271 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 KANK3Q6NY19 840 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 CCDC62Q6P9F0 684 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 CCDC149Q6ZUS6 474 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 LSM14AQ8ND56 463 aaKnown RBP7.23□□□□□ -1.25
LINC00649-220ENST00000628906 HNRNPLLQ8WVV9 542 aaKnown RBP7.23□□□□□ -1.25
LINC00649-220ENST00000628906 LRIG1Q96JA1 1093 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 KLHL5Q96PQ7 755 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 UBL7Q96S82 380 aaPredicted RBP7.23□□□□□ -1.25
LINC00649-220ENST00000628906 BCAS3Q9H6U6 928 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 SCUBE2Q9NQ36 999 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 FEM1BQ9UK73 627 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 MTF2Q9Y483 593 aaPredicted RBP7.23□□□□□ -1.25
LINC00649-220ENST00000628906 PTPRQQ9UMZ3 2332 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 FRMPD2Q68DX3 1309 aaPredicted RBP7.23□□□□□ -1.25
LINC00649-220ENST00000628906 MYH7BA7E2Y1 1941 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 MIA3Q5JRA6 1907 aa7.23□□□□□ -1.25
LINC00649-220ENST00000628906 DENND4AQ7Z401 1863 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 FAM170BA6NMN3 283 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 RAD21O60216 631 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 LILRB3O75022 631 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 N4BP1O75113 896 aaKnown RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 ARIH2O95376 493 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 UQCRFS1P1P0C7P4 283 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 CEACAM1P13688 526 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 EDNRBP24530 442 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 HOXC8P31273 242 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 RPS9P46781 194 aaKnown RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 PLCB3Q01970 1234 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 ARHGAP1Q07960 439 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 APOBRQ0VD83 1088 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 SIM2Q14190 667 aaPredicted RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 GPR149Q86SP6 731 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 DHX37Q8IY37 1157 aaKnown RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 ZNF843Q8N446 348 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 MRPL43Q8N983 215 aaKnown RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 C12orf50Q8NA57 414 aaPredicted RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 MIGA1Q8NAN2 632 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 MRPS27Q92552 414 aaKnown RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 TCF25Q9BQ70 676 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 EHMT1Q9H9B1 1298 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 DZANK1Q9NVP4 752 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 EPS15L1Q9UBC2 864 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 PUF60Q9UHX1 559 aaKnown RBP7.22□□□□□ -1.25
LINC00649-220ENST00000628906 PCNX2A6NKB5 2137 aa7.22□□□□□ -1.25
LINC00649-220ENST00000628906 GREB1Q4ZG55 1949 aa7.21□□□□□ -1.25
LINC00649-220ENST00000628906 C2orf71A6NGG8 1288 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 APAF1O14727 1248 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 RIOK3O14730 519 aaKnown RBP7.21□□□□□ -1.26
LINC00649-220ENST00000628906 HRO43593 1189 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 CLASP2O75122 1294 aaKnown RBP7.21□□□□□ -1.26
LINC00649-220ENST00000628906 NDUFB10O96000 172 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 KCNC4Q03721 635 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 PRKCQQ04759 706 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 FZD5Q13467 585 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 PAN2Q504Q3 1202 aaKnown RBP7.21□□□□□ -1.26
LINC00649-220ENST00000628906 MUM1L1Q5H9M0 696 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 GORABQ5T7V8 394 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 RSPO2Q6UXX9 243 aaPredicted RBP7.21□□□□□ -1.26
LINC00649-220ENST00000628906 RTN4RL1Q86UN2 441 aaPredicted RBP7.21□□□□□ -1.26
LINC00649-220ENST00000628906 NPAS4Q8IUM7 802 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 ATP6V0A1Q93050 837 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 DYNLL2Q96FJ2 89 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 NEUROD6Q96NK8 337 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 MYADMQ96S97 322 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 MCM9Q9NXL9 1143 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 PA2G4Q9UQ80 394 aaKnown RBP7.21□□□□□ -1.26
LINC00649-220ENST00000628906 DOCK8Q8NF50 2099 aa7.21□□□□□ -1.26
LINC00649-220ENST00000628906 ATXN7O15265 892 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms