RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SERPINA10Q9UK55 444 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 SAR1BQ9Y6B6 198 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 PKD1L3Q7Z443 1732 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 PLSCR1O15162 318 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 KLRC4O43908 158 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 CEP104O60308 925 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 DDNO94850 711 aaPredicted RBP8.25□□□□□ -1.09
PKP4-217ENST00000628904 CYP11B2P19099 503 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 RPS6P62753 249 aaKnown RBP8.25□□□□□ -1.09
PKP4-217ENST00000628904 MTMR1Q13613 665 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 ASIC2Q16515 512 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 MAN2A1Q16706 1144 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 EPC2Q52LR7 807 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 METTL13Q8N6R0 699 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 FAM163AQ96GL9 167 aaPredicted RBP8.25□□□□□ -1.09
PKP4-217ENST00000628904 TEKT3Q9BXF9 490 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 EHMT1Q9H9B1 1298 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 ACP6Q9NPH0 428 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 LRRIQ4A6NIV6 560 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 CSDE1O75534 798 aaKnown RBP8.25□□□□□ -1.09
PKP4-217ENST00000628904 CEP55Q53EZ4 464 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 RNF207Q6ZRF8 634 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 GLG1Q92896 1179 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 CEP170P1Q96L14 293 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 TMOD4Q9NZQ9 345 aa8.25□□□□□ -1.09
PKP4-217ENST00000628904 ANKRD65E5RJM6 399 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 KCNK3O14649 394 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 GPS2Q13227 327 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 BMS1Q14692 1282 aaKnown RBP8.24□□□□□ -1.09
PKP4-217ENST00000628904 ZNF394Q53GI3 561 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 MUM1L1Q5H9M0 696 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 DCAF4Q8WV16 495 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 PACSIN1Q9BY11 444 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 CCDC113Q9H0I3 377 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 SH2D4AQ9H788 454 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 RNF146Q9NTX7 359 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 NYAP2Q9P242 653 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 STK17AQ9UEE5 414 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 ODF2Q5BJF6 829 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 CDKAL1Q5VV42 579 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 SWSAP1Q6NVH7 229 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 TRIM65Q6PJ69 517 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 FAM186BQ8IYM0 893 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 NLGN2Q8NFZ4 835 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 RIN2Q8WYP3 895 aaPredicted RBP8.24□□□□□ -1.09
PKP4-217ENST00000628904 WNK4Q96J92 1243 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 POP1Q99575 1024 aaKnown RBP8.24□□□□□ -1.09
PKP4-217ENST00000628904 AP1M1Q9BXS5 423 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 VCPKMTQ9H867 229 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 KCNH7Q9NS40 1196 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 SPEF2Q9C093 1822 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 RCCD1A6NED2 376 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 ERLIN1O75477 346 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 TNNI1P19237 187 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 CAP2P40123 477 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 VPS41P49754 854 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 MAP2K1Q02750 393 aaPredicted RBP8.24□□□□□ -1.09
PKP4-217ENST00000628904 FAM151AQ8WW52 585 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 PANX2Q96RD6 677 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 THAP9Q9H5L6 903 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 PARVGQ9HBI0 331 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 AKAP11Q9UKA4 1901 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 KDM3AQ9Y4C1 1321 aa8.24□□□□□ -1.09
PKP4-217ENST00000628904 SIPA1L3O60292 1781 aaPredicted RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 HNRNPDLO14979 420 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 NR3C1P04150 777 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 RPL13P26373 211 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 PADI6Q6TGC4 694 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 HAUS4Q9H6D7 363 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 PDE11AQ9HCR9 933 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 LIMA1Q9UHB6 759 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 CDC23Q9UJX2 597 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 PRDM4Q9UKN5 801 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 PCDHA13Q9Y5I0 950 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 SRGAP2CP0DJJ0 459 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 IRX3P78415 501 aaPredicted RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 ZBED6P86452 979 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 TNFAIP1Q13829 316 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 GPR162Q16538 588 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 Q3C1V9 767 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 NT5DC1Q5TFE4 455 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 STYK1Q6J9G0 422 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 ZBTB33Q86T24 672 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 VPS36Q86VN1 386 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 SCFD1Q8WVM8 642 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 MMS19Q96T76 1030 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 LUC7LQ9NQ29 371 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 RNF181Q9P0P0 153 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 PDS5AQ29RF7 1337 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 CICQ96RK0 1608 aaPredicted RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 XIRP1Q702N8 1843 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 FANCGO15287 622 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 HIP1RO75146 1068 aa8.23□□□□□ -1.09
PKP4-217ENST00000628904 FOSP01100 380 aaPredicted RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 MYCP01106 439 aaPredicted RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 GCFC2P16383 781 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 OAS2P29728 719 aaKnown RBP8.23□□□□□ -1.09
PKP4-217ENST00000628904 COPB2P35606 906 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms