RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 PIK3CDO00329 1044 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 KIAA0355O15063 1070 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 EPB41L2O43491 1005 aaKnown RBP8.84□□□□□ -0.99
TCF4-260ENST00000627685 TRAK2O60296 914 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 RPS6KB1P23443 525 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 PURAQ00577 322 aaKnown RBP8.84□□□□□ -0.99
TCF4-260ENST00000627685 SP2Q02086 613 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 PGM5Q15124 567 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 IQSEC1Q6DN90 963 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 CXCL17Q6UXB2 119 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 MICU3Q86XE3 530 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 TDHQ8IZJ6 230 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 PCSK9Q8NBP7 692 aaKnown RBP8.84□□□□□ -0.99
TCF4-260ENST00000627685 NUP133Q8WUM0 1156 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 CRYGNQ8WXF5 182 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 KAT2BQ92831 832 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 SPC25Q9HBM1 224 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 ADD3Q9UEY8 706 aaKnown RBP8.84□□□□□ -0.99
TCF4-260ENST00000627685 Q9Y3F1 56 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 SCN10AQ9Y5Y9 1956 aa8.83□□□□□ -1
TCF4-260ENST00000627685 C6orf222P0C671 652 aaPredicted RBP8.83□□□□□ -1
TCF4-260ENST00000627685 EIF2AK2P19525 551 aaKnown RBP8.83□□□□□ -1
TCF4-260ENST00000627685 RCAN1P53805 252 aa8.83□□□□□ -1
TCF4-260ENST00000627685 PSMC6P62333 389 aa8.83□□□□□ -1
TCF4-260ENST00000627685 ST3GAL1Q11201 340 aa8.83□□□□□ -1
TCF4-260ENST00000627685 USP4Q13107 963 aa8.83□□□□□ -1
TCF4-260ENST00000627685 PKN1Q16512 942 aa8.83□□□□□ -1
TCF4-260ENST00000627685 FSCN1Q16658 493 aaKnown RBP8.83□□□□□ -1
TCF4-260ENST00000627685 OXLD1Q5BKU9 147 aa8.83□□□□□ -1
TCF4-260ENST00000627685 C9orf50Q5SZB4 431 aa8.83□□□□□ -1
TCF4-260ENST00000627685 WWC2Q6AWC2 1192 aa8.83□□□□□ -1
TCF4-260ENST00000627685 KIAA1211Q6ZU35 1233 aa8.83□□□□□ -1
TCF4-260ENST00000627685 C16orf59Q7L2K0 433 aa8.83□□□□□ -1
TCF4-260ENST00000627685 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
TCF4-260ENST00000627685 CATIPQ7Z7H3 387 aa8.83□□□□□ -1
TCF4-260ENST00000627685 VSIG10LQ86VR7 867 aa8.83□□□□□ -1
TCF4-260ENST00000627685 FANCBQ8NB91 859 aa8.83□□□□□ -1
TCF4-260ENST00000627685 PPP1R13LQ8WUF5 828 aa8.83□□□□□ -1
TCF4-260ENST00000627685 INPP4AQ96PE3 977 aaPredicted RBP8.83□□□□□ -1
TCF4-260ENST00000627685 RMDN3Q96TC7 470 aa8.83□□□□□ -1
TCF4-260ENST00000627685 SEZ6LQ9BYH1 1024 aa8.83□□□□□ -1
TCF4-260ENST00000627685 WDR11Q9BZH6 1224 aa8.83□□□□□ -1
TCF4-260ENST00000627685 UBE2OQ9C0C9 1292 aaKnown RBP8.83□□□□□ -1
TCF4-260ENST00000627685 PRKAG2Q9UGJ0 569 aa8.83□□□□□ -1
TCF4-260ENST00000627685 ATP11BQ9Y2G3 1177 aa8.83□□□□□ -1
TCF4-260ENST00000627685 MRPL11Q9Y3B7 192 aaKnown RBP8.83□□□□□ -1
TCF4-260ENST00000627685 PCDHA1Q9Y5I3 950 aa8.83□□□□□ -1
TCF4-260ENST00000627685 STXBP3O00186 592 aa8.82□□□□□ -1
TCF4-260ENST00000627685 HAS3O00219 553 aa8.82□□□□□ -1
TCF4-260ENST00000627685 B4GALT4O60513 344 aa8.82□□□□□ -1
TCF4-260ENST00000627685 CABYRO75952 493 aa8.82□□□□□ -1
TCF4-260ENST00000627685 CFBP00751 764 aa8.82□□□□□ -1
TCF4-260ENST00000627685 UBA1P22314 1058 aaKnown RBP8.82□□□□□ -1
TCF4-260ENST00000627685 HOXC8P31273 242 aa8.82□□□□□ -1
TCF4-260ENST00000627685 RNF144AP50876 292 aaPredicted RBP8.82□□□□□ -1
TCF4-260ENST00000627685 APOBRQ0VD83 1088 aa8.82□□□□□ -1
TCF4-260ENST00000627685 SART3Q15020 963 aaKnown RBP8.82□□□□□ -1
TCF4-260ENST00000627685 NPY5RQ15761 445 aa8.82□□□□□ -1
TCF4-260ENST00000627685 RASIP1Q5U651 963 aa8.82□□□□□ -1
TCF4-260ENST00000627685 USP17L6PQ6QN14 398 aa8.82□□□□□ -1
TCF4-260ENST00000627685 LYSMD3Q7Z3D4 306 aa8.82□□□□□ -1
TCF4-260ENST00000627685 CCDC155Q8N6L0 562 aa8.82□□□□□ -1
TCF4-260ENST00000627685 SCFD2Q8WU76 684 aa8.82□□□□□ -1
TCF4-260ENST00000627685 PIBF1Q8WXW3 757 aa8.82□□□□□ -1
TCF4-260ENST00000627685 GLT1D1Q96MS3 346 aa8.82□□□□□ -1
TCF4-260ENST00000627685 JAKMIP1Q96N16 626 aaKnown RBP8.82□□□□□ -1
TCF4-260ENST00000627685 LBHD1Q9BQE6 289 aaPredicted RBP8.82□□□□□ -1
TCF4-260ENST00000627685 WNT8AQ9H1J5 351 aa8.82□□□□□ -1
TCF4-260ENST00000627685 STARD7Q9NQZ5 370 aa8.82□□□□□ -1
TCF4-260ENST00000627685 DDX41Q9UJV9 622 aaKnown RBP8.82□□□□□ -1
TCF4-260ENST00000627685 TANC1Q9C0D5 1861 aa8.82□□□□□ -1
TCF4-260ENST00000627685 KLF18A0A0U1RQI7 1052 aa8.81□□□□□ -1
TCF4-260ENST00000627685 ERICH2A1L162 156 aa8.81□□□□□ -1
TCF4-260ENST00000627685 ARVCFO00192 962 aa8.81□□□□□ -1
TCF4-260ENST00000627685 DYNC1LI2O43237 492 aaPredicted RBP8.81□□□□□ -1
TCF4-260ENST00000627685 F2P00734 622 aa8.81□□□□□ -1
TCF4-260ENST00000627685 MMP3P08254 477 aa8.81□□□□□ -1
TCF4-260ENST00000627685 CLTBP09497 229 aa8.81□□□□□ -1
TCF4-260ENST00000627685 ICAM3P32942 547 aa8.81□□□□□ -1
TCF4-260ENST00000627685 GMPRP36959 345 aa8.81□□□□□ -1
TCF4-260ENST00000627685 GPNMBQ14956 572 aa8.81□□□□□ -1
TCF4-260ENST00000627685 UBE2SQ16763 222 aa8.81□□□□□ -1
TCF4-260ENST00000627685 LY6KQ17RY6 165 aa8.81□□□□□ -1
TCF4-260ENST00000627685 C8orf34Q49A92 452 aa8.81□□□□□ -1
TCF4-260ENST00000627685 GNASQ5JWF2 1037 aa8.81□□□□□ -1
TCF4-260ENST00000627685 CASC1Q6TDU7 716 aa8.81□□□□□ -1
TCF4-260ENST00000627685 CTCFLQ8NI51 663 aaPredicted RBP8.81□□□□□ -1
TCF4-260ENST00000627685 NSUN6Q8TEA1 469 aaKnown RBP8.81□□□□□ -1
TCF4-260ENST00000627685 DHX38Q92620 1227 aaKnown RBP8.81□□□□□ -1
TCF4-260ENST00000627685 BADQ92934 168 aa8.81□□□□□ -1
TCF4-260ENST00000627685 BRF1Q92994 677 aa8.81□□□□□ -1
TCF4-260ENST00000627685 WNT8BQ93098 351 aa8.81□□□□□ -1
TCF4-260ENST00000627685 IWS1Q96ST2 819 aa8.81□□□□□ -1
TCF4-260ENST00000627685 MPHOSPH6Q99547 160 aaKnown RBP8.81□□□□□ -1
TCF4-260ENST00000627685 KIF2CQ99661 725 aa8.81□□□□□ -1
TCF4-260ENST00000627685 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
TCF4-260ENST00000627685 MAP3K20Q9NYL2 800 aaKnown RBP8.81□□□□□ -1
TCF4-260ENST00000627685 SLC12A7Q9Y666 1083 aa8.81□□□□□ -1
TCF4-260ENST00000627685 KIAA1217Q5T5P2 1943 aa8.81□□□□□ -1
TCF4-260ENST00000627685 MROH7Q68CQ1 1323 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms