RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ZC3H15Q8WU90 426 aaKnown RBP11.99□□□□□ -0.49
VPS8-227ENST00000625842 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 TLDC2A0PJX2 215 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 ZNF197O14709 1029 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 MAFGO15525 162 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 SPATA2LQ8IUW3 424 aaPredicted RBP11.99□□□□□ -0.49
VPS8-227ENST00000625842 NUDCD1Q96RS6 583 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 TJP2Q9UDY2 1190 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 CABYRO75952 493 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 IFNB1P01574 187 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 URODP06132 367 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 HSPA4P34932 840 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 MNAT1P51948 309 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 DDX42Q86XP3 938 aaKnown RBP eCLIP11.99□□□□□ -0.49
VPS8-227ENST00000625842 SEPT1Q8WYJ6 367 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 FAM227BQ96M60 508 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 KRT12Q99456 494 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 SELENOSQ9BQE4 189 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 RBSNQ9H1K0 784 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 VPS16Q9H269 839 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 TMEM39AQ9NV64 488 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 ZNF70Q9UC06 446 aaPredicted RBP11.99□□□□□ -0.49
VPS8-227ENST00000625842 MYO5CQ9NQX4 1742 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 GPR182O15218 404 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 AMHP03971 560 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 MXD4Q14582 209 aaPredicted RBP11.99□□□□□ -0.49
VPS8-227ENST00000625842 PRR5LQ6MZQ0 368 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 TRIM54Q9BYV2 358 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
VPS8-227ENST00000625842 EGFRP00533 1210 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 HSP90AA4PQ58FG1 418 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 DNAJC24Q6P3W2 148 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 ARHGAP24Q8N264 748 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 SH3KBP1Q96B97 665 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 HDAC11Q96DB2 347 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 MTA3Q9BTC8 594 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 TIPINQ9BVW5 301 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 SOX5P35711 763 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 PSMC5P62195 406 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 KLHL40Q2TBA0 621 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 HHATQ5VTY9 493 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 GPKOWQ92917 476 aaPredicted RBP eCLIP11.98□□□□□ -0.49
VPS8-227ENST00000625842 CCDC51Q96ER9 411 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 P4HBP07237 508 aaKnown RBP11.98□□□□□ -0.49
VPS8-227ENST00000625842 STAT5BP51692 787 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 FKBP1BP68106 108 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 TBC1D16Q8TBP0 767 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 GJA10Q969M2 543 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 SNX21Q969T3 373 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 SEC62Q99442 399 aaKnown RBP11.98□□□□□ -0.49
VPS8-227ENST00000625842 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 VCXQ9H320 206 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 NDUFB9Q9Y6M9 179 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 ITGA4P13612 1032 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 PAPOLAP51003 745 aaKnown RBP11.98□□□□□ -0.49
VPS8-227ENST00000625842 CCDC170Q8IYT3 715 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 TMEM199Q8N511 208 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
VPS8-227ENST00000625842 MAD1L1Q9Y6D9 718 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 UBN2Q6ZU65 1347 aa11.98□□□□□ -0.49
VPS8-227ENST00000625842 CDK12Q9NYV4 1490 aaPredicted RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 ZMYND10O75800 440 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 CD4P01730 458 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 SKILP12757 684 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 MXI1P50539 228 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 PRELPP51888 382 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 DYNLL1P63167 89 aaKnown RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 ZNF467Q7Z7K2 595 aaPredicted RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 MYLK4Q86YV6 388 aaPredicted RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 GPATCH11Q8N954 259 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 DNAAF3Q8N9W5 541 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 OPTNQ96CV9 577 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 SCYL1Q96KG9 808 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 LSM14BQ9BX40 385 aaKnown RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 PIN4Q9Y237 131 aaKnown RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 CLGNO14967 610 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 CYP27B1O15528 508 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 MTMR2Q13614 643 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 MAPRE1Q15691 268 aaKnown RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 ZMYM1Q5SVZ6 1142 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 ANKS3Q6ZW76 656 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 ZSCAN30Q86W11 494 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 F5H6K3 240 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 H2AFZP0C0S5 128 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 PCSK1P29120 753 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 OSTNP61366 133 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 KLRC3Q07444 240 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 H2AFVQ71UI9 128 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 LDHDQ86WU2 507 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 SCYL3Q8IZE3 742 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 GIMAP7Q8NHV1 300 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms