RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 GRK2P25098 689 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 EVI2BP34910 448 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 TRIM23P36406 574 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 RFC5P40937 340 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 CBX5P45973 191 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 GCGRP47871 477 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 MAPKAPK2P49137 400 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 MARSP56192 900 aaKnown RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 MAP3K7CLP57077 242 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 CYP4A11Q02928 519 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 FAM69CQ0P6D2 419 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 NFIAQ12857 509 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 HLTFQ14527 1009 aaKnown RBP eCLIP5.6□□□□□ -1.51
CHD2-204ENST00000625463 SQLEQ14534 574 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 DIXDC1Q155Q3 683 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 PCSK7Q16549 785 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 IFI16Q16666 785 aaKnown RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 QPCTQ16769 361 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 FAM98CQ17RN3 349 aaKnown RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 P3H1Q32P28 736 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 TMEM95Q3KNT9 176 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 ACCSLQ4AC99 568 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 LACTB2Q53H82 288 aaPredicted RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 METTL24Q5JXM2 366 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 TRAPPC3LQ5T215 181 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SYCP2LQ5T4T6 812 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SNX30Q5VWJ9 437 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 PPP2R2DQ66LE6 453 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 FAM173BQ6P4H8 233 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 ABRAXAS1Q6UWZ7 409 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 TAS1R3Q7RTX0 852 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SAMD7Q7Z3H4 446 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 LRRTM3Q86VH5 581 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SLC44A2Q8IWA5 706 aaPredicted RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 TMEM57Q8N5G2 664 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 CFAP61Q8NHU2 1237 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 FAM149B1Q96BN6 582 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 INTS12Q96CB8 462 aaKnown RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 PGBD4Q96DM1 585 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 VPS50Q96JG6 964 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 COG8Q96MW5 612 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 ZNF570Q96NI8 536 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SERINC2Q96SA4 455 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 RIOK1Q9BRS2 568 aaKnown RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 TSEN34Q9BSV6 310 aaKnown RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 GLT8D2Q9H1C3 349 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 DNAJC25Q9H1X3 360 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 PLEKHA4Q9H4M7 779 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 C8orf33Q9H7E9 229 aaPredicted RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 DBNDD1Q9H9R9 158 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SCPEP1Q9HB40 452 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 PLSCR2Q9NRY7 297 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 FARSBQ9NSD9 589 aaKnown RBP5.6□□□□□ -1.51
CHD2-204ENST00000625463 MBD2Q9UBB5 411 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 ZNF69Q9UC07 566 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 L1RE1Q9UN81 338 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 CHMP2BQ9UQN3 213 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 TMEM5Q9Y2B1 443 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 L3MBTL1Q9Y468 752 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SNX9Q9Y5X1 595 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 SNX8Q9Y5X2 465 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 NR2E3Q9Y5X4 410 aa5.6□□□□□ -1.51
CHD2-204ENST00000625463 ZNF536O15090 1300 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 SYNJ2BP-COX16A0A087WUM0 186 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 A0A0J9YVX5 310 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 FADS2P1A8MWK0 482 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 RSPH10B2B2RC85 870 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 UBAP1LF5GYI3 381 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 GCOM1H8Y6P7 765 aaPredicted RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 IGF2BP3O00425 579 aaKnown RBP eCLIP5.59□□□□□ -1.51
CHD2-204ENST00000625463 APOL1O14791 398 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 PRPF3O43395 683 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 DDHD2O94830 711 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 SEC24DO94855 1032 aaPredicted RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 PRPF6O94906 941 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 OR5F1O95221 314 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 ECDO95905 644 aaPredicted RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 LMNAP02545 664 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 RSPH10BP0C881 870 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 RAC2P15153 192 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 RXRAP19793 462 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 CFL1P23528 166 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 PPP2R1AP30153 589 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 RPL9P32969 192 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 ADD2P35612 726 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 PSMC2P35998 433 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 CAP2P40123 477 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 UBA7P41226 1012 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 ECE1P42892 770 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 ADARP55265 1226 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 ETF1P62495 437 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 CD83Q01151 205 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 GUCA2AQ02747 115 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 DNM1Q05193 864 aaKnown RBP5.59□□□□□ -1.51
CHD2-204ENST00000625463 FAPQ12884 760 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 DNAJC3Q13217 504 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 ADAM9Q13443 819 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 LSAMPQ13449 338 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 TCIRG1Q13488 830 aa5.59□□□□□ -1.51
CHD2-204ENST00000625463 STK38Q15208 465 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms