RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, human

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKL5-208	ENST00000624953	USP32	Q8NFA0	1604 aa		4.65	□□□□□ -1.66
CDKL5-208	ENST00000624953	VPS8	Q8N3P4	1428 aa		4.65	□□□□□ -1.66
CDKL5-208	ENST00000624953	MYOM2	P54296	1465 aa		4.65	□□□□□ -1.66
CDKL5-208	ENST00000624953	ZC3H12D	A2A288	527 aa	Known RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	BCL6	P41182	706 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	LINC00310	P59036	64 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	DLX2	Q07687	328 aa	Predicted RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	SSRP1	Q08945	709 aa	Known RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	SSPN	Q14714	243 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	LCE5A	Q5TCM9	118 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	MEX3C	Q5U5Q3	659 aa	Known RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	ZC3H14	Q6PJT7	736 aa	Known RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	ATG14	Q6ZNE5	492 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	TMC6	Q7Z403	805 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	THAP3	Q8WTV1	239 aa	Predicted RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	PPP1R14A	Q96A00	147 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	DACT3	Q96B18	629 aa	Predicted RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	PEX11G	Q96HA9	241 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	DNAJC2	Q99543	621 aa	Known RBP	4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	DNAJC7	Q99615	494 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	SGPP1	Q9BX95	441 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	RRP7BP	Q9NSQ0	103 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	NUP188	Q5SRE5	1749 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	FMN2	Q9NZ56	1722 aa		4.65	□□□□□ -1.67
CDKL5-208	ENST00000624953	ADGRL3	Q9HAR2	1447 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	CHD4	Q14839	1912 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	UTRN	P46939	3433 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	PXDN	Q92626	1479 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	KNDC1	Q76NI1	1749 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	TRBV23-1	A0A0A0MS06	115 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	C22orf46	C9J442	243 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	ZBTB7A	O95365	584 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	NTRK1	P04629	796 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	ASGR2	P07307	311 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	ATF2	P15336	505 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	FPR2	P25090	351 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	GPR85	P60893	370 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	RBM6	P78332	1123 aa	Known RBP	4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	LSAMP	Q13449	338 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	KCNA10	Q16322	511 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	FAM209A	Q5JX71	171 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	CYP4F22	Q6NT55	531 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	LILRA6	Q6PI73	481 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	DCP2	Q8IU60	420 aa	Known RBP	4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	TEX2	Q8IWB9	1127 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	SEC14L1	Q92503	715 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	SIGLEC10	Q96LC7	697 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	DHRS4	Q9BTZ2	278 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	PHF20	Q9BVI0	1012 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	PIF1	Q9H611	641 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	MARCH2	Q9P0N8	246 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	PFDN2	Q9UHV9	154 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	MRPS23	Q9Y3D9	190 aa	Known RBP	4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	TBX22	Q9Y458	520 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	SBF2	Q86WG5	1849 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	KDM2B	Q8NHM5	1336 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	MET	P08581	1390 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	PIK3R4	Q99570	1358 aa		4.64	□□□□□ -1.67
CDKL5-208	ENST00000624953	C1orf167	Q5SNV9	1468 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	CCDC163	A0A0D9SF12	145 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	ARVCF	O00192	962 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	NFIB	O00712	420 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	FUCA1	P04066	466 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	SUMO1	P63165	101 aa	Known RBP	4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	ZNF200	P98182	395 aa	Predicted RBP	4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	IFRD2	Q12894	506 aa	Predicted RBP	4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	SQSTM1	Q13501	440 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	NFE2L2	Q16236	605 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	VWA3B	Q502W6	1294 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	KCNT2	Q6UVM3	1135 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	B3GNT8	Q7Z7M8	397 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	FAM129C	Q86XR2	697 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	SIAH1	Q8IUQ4	282 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	TTLL11	Q8NHH1	800 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	PTPRN2	Q92932	1015 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	KCNN1	Q92952	543 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	TOX2	Q96NM4	488 aa		4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	SRPK1	Q96SB4	655 aa	Known RBP	4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.63	□□□□□ -1.67
CDKL5-208	ENST00000624953	CDC42BPG	Q6DT37	1551 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	THSD7A	Q9UPZ6	1657 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	BLACE	A4D250	179 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953		F8W031	263 aa	Predicted RBP	4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	TMEM253	P0C7T8	217 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	ZSCAN22	P10073	491 aa	Predicted RBP	4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	PML	P29590	882 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	BUD31	P41223	144 aa	Predicted RBP	4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	KCNJ6	P48051	423 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	KIZ	Q2M2Z5	673 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	CCDC144B	Q3MJ40	725 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	USP53	Q70EK8	1073 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	CEP68	Q76N32	757 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	LINC00482	Q8N8I6	264 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	ZSWIM2	Q8NEG5	633 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	KRTAP9-3	Q9BYQ3	159 aa		4.62	□□□□□ -1.67
CDKL5-208	ENST00000624953	TMEM260	Q9NX78	707 aa		4.62	□□□□□ -1.67

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