RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SRRTQ9BXP5 876 aaKnown RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 POLR3FQ9H1D9 316 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 SLC15A5A6NIM6 579 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 H3BRB1 525 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 SLC16A4O15374 487 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 CAVIN2O95810 425 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 LMAN1P49257 510 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 NLRP11P59045 1033 aaKnown RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 PAK2Q13177 524 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 FSCN1Q16658 493 aaKnown RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 RASGRP2Q7LDG7 609 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 APBA2Q99767 749 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 TUT1Q9H6E5 874 aaKnown RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 PCDHA7Q9UN72 937 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 MAFGO15525 162 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 HBP1O60381 514 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 FARP2O94887 1054 aaPredicted RBP9.96□□□□□ -0.81
HDAC9-229ENST00000622668 KIAA0753Q2KHM9 967 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 DCUN1D2Q6PH85 259 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 GMCL1P1Q8NEA9 526 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 IPO4Q8TEX9 1081 aaKnown RBP9.96□□□□□ -0.81
HDAC9-229ENST00000622668 NELFBQ8WX92 580 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 MXRA8Q9BRK3 442 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 CRACR2AQ9BSW2 395 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 CREBZFQ9NS37 354 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 DPYSL4O14531 572 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 HMGCRP04035 888 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 NEFHP12036 1026 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 MAP2K2P36507 400 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 PIK3CAP42336 1068 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 TYRO3Q06418 890 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 TROAPQ12815 778 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 MYO1EQ12965 1108 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 SLC39A14Q15043 492 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 SCN4BQ8IWT1 228 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 NEK9Q8TD19 979 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 SYTL5Q8TDW5 730 aaPredicted RBP9.96□□□□□ -0.81
HDAC9-229ENST00000622668 CCDC42Q96M95 316 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 TUBE1Q9UJT0 475 aa9.96□□□□□ -0.81
HDAC9-229ENST00000622668 PRG3Q9Y2Y8 225 aaPredicted RBP9.96□□□□□ -0.81
HDAC9-229ENST00000622668 MON2Q7Z3U7 1717 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 RIC1Q4ADV7 1423 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 SYNJ2BP-COX16A0A087WUM0 186 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 RRN3P2A6NIE6 340 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 ZNF286BP0CG31 522 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 HSPA1AP0DMV8 641 aaKnown RBP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 HSPA1BP0DMV9 641 aaKnown RBP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 TNFAIP3P21580 790 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 VEGFBP49765 207 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 MYL5Q02045 173 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 PRKCEQ02156 737 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 EPHA7Q15375 998 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 ANKRD23Q86SG2 305 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 RUFY1Q96T51 708 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 PDCD2LQ9BRP1 358 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 COX16Q9P0S2 106 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 STK17AQ9UEE5 414 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 TAF6LQ9Y6J9 622 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 KCPQ6ZWJ8 1503 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 SYNRGQ9UMZ2 1314 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 KLRG2A4D1S0 409 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 TBC1D12O60347 775 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 PEX10O60683 326 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 CPB1P15086 417 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 NR2F2P24468 414 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 CCL23P55773 120 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 LY6KQ17RY6 165 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 EFCAB12Q6NXP0 572 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 IFNL1Q8IU54 200 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 PPP1R13LQ8WUF5 828 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 TMEM169Q96HH4 297 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 EPSTI1Q96J88 318 aa9.96□□□□□ -0.82
HDAC9-229ENST00000622668 EIF2AK1Q9BQI3 630 aaKnown RBP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 MTG1Q9BT17 334 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-229ENST00000622668 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-229ENST00000622668 YWHABP31946 246 aaKnown RBP9.95□□□□□ -0.82
HDAC9-229ENST00000622668 ANTXR2P58335 489 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 RNASE9P60153 205 aaKnown RBP9.95□□□□□ -0.82
HDAC9-229ENST00000622668 CTU1Q7Z7A3 348 aaKnown RBP9.95□□□□□ -0.82
HDAC9-229ENST00000622668 FAM43AQ8N2R8 423 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 SEPT8Q92599 483 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 ZMYND15Q9H091 742 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 TMEM206Q9H813 350 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 EMILIN3Q9NT22 766 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 GSTTP1A0A1W2PQM5 241 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 TCRBV5S4A2TA0A5A2 114 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 SMIM22K7EJ46 135 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 TLR2O60603 784 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 BCRP11274 1271 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 ACTR2P61160 394 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 PLA2G4FQ68DD2 849 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 XRRA1Q6P2D8 792 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 SLC30A10Q6XR72 485 aa9.95□□□□□ -0.82
HDAC9-229ENST00000622668 NLRC4Q9NPP4 1024 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms