RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TRIM75PA6NK02 468 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 ERVV-1B6SEH8 477 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PPP1R3GB7ZBB8 358 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 F8VZ95 297 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PRPF3O43395 683 aaKnown RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 CYP7A1P22680 504 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 MSH2P43246 934 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 SESN3P58005 492 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 DYNLL1P63167 89 aaKnown RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 CBX3Q13185 183 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 BTG3Q14201 252 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 TRIM68Q6AZZ1 485 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 BICDL1Q6ZP65 573 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 SPICE1Q8N0Z3 855 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 LRRC43Q8N309 656 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 DOT1LQ8TEK3 1739 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 TNFRSF25Q93038 417 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PPP2R3CQ969Q6 453 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 TEKT1Q969V4 418 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNF653Q96CK0 615 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 FAM81BQ96LP2 452 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 UBAC1Q9BSL1 405 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 NACAP1Q9BZK3 213 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 RAB17Q9H0T7 212 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PCDH18Q9HCL0 1135 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 POLD4Q9HCU8 107 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 LUC7LQ9NQ29 371 aaKnown RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 JADE2Q9NQC1 790 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 BTG4Q9NY30 223 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 SLAIN2Q9P270 581 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 CTTNBP2NLQ9P2B4 639 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 TRIM10Q9UDY6 481 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 DAAM1Q9Y4D1 1078 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 HYOU1Q9Y4L1 999 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 MYH7BA7E2Y1 1941 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 BAZ2BQ9UIF8 2168 aaKnown RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 TAF1P21675 1872 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNF185O15231 689 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 GNAT2P19087 354 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 KCNA4P22459 653 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 CYLC1P35663 651 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 IL6STP40189 918 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 CHRNDQ07001 517 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 SPAG1Q07617 926 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNF174Q15697 407 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 ERMARDQ5T6L9 678 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 C3orf67Q6ZVT6 689 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PIGWQ7Z7B1 504 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNF384Q8TF68 577 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PTPRN2Q92932 1015 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 RAB3IPQ96QF0 476 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 NUP88Q99567 741 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 MTRQ99707 1265 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 RNF26Q9BY78 433 aaPredicted RBP8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 ARHGEF3Q9NR81 526 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 DLGAP2Q9P1A6 1054 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 SAMD15Q9P1V8 674 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 PDP2Q9P2J9 529 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 LRP2BPQ9P2M1 347 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 RNF14Q9UBS8 474 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 CTNND2Q9UQB3 1225 aa8.17□□□□□ -1.1
TRIM49B-202ENST00000622138 DLEC1Q9Y238 1755 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RTL9Q8NET4 1388 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 MROH7Q68CQ1 1323 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 LAMB2P55268 1798 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 IGF2BP3O00425 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RARAP10276 462 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 VEGFAP15692 232 aaPredicted RBP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 NAT1P18440 290 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 CDC25AP30304 524 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 KRT2P35908 639 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RFC5P40937 340 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 SKIV2L2P42285 1042 aaKnown RBP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 PAFAH1B1P43034 410 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 GYG1P46976 350 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RCAN1P53805 252 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 KCNJ2P63252 427 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 MTMR3Q13615 1198 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 IL17AQ16552 155 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RNF220Q5VTB9 566 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 GALNT17Q6IS24 598 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 KANK3Q6NY19 840 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 INTS5Q6P9B9 1019 aaKnown RBP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 CEP128Q6ZU80 1094 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 STKLD1Q8NE28 680 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 SH3TC2Q8TF17 1288 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RSPH1Q8WYR4 309 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 KCNN1Q92952 543 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 LRRC45Q96CN5 670 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 XPO6Q96QU8 1125 aaKnown RBP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RIOK1Q9BRS2 568 aaKnown RBP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 BRD8Q9H0E9 1235 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 CARD9Q9H257 536 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 BLZF1Q9H2G9 400 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 RNPEPL1Q9HAU8 725 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNHIT6Q9NWK9 470 aaKnown RBP8.16□□□□□ -1.1
TRIM49B-202ENST00000622138 ATP8A1Q9Y2Q0 1164 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms