RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 BCAP29Q9UHQ4 241 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 TXNDC9O14530 226 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 WDR46O15213 610 aaKnown RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 LMNAP02545 664 aaKnown RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 GMPSP49915 693 aaPredicted RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 RASA3Q14644 834 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 HHATQ5VTY9 493 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 NRKQ7Z2Y5 1582 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 OATP04181 439 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 MYL1P05976 194 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 H2AFXP16104 143 aaPredicted RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 GTF2A2P52657 109 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 GUCY2DQ02846 1103 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 COG2Q14746 738 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 APOA5Q6Q788 366 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 UBL4BQ8N7F7 174 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 MCPH1Q8NEM0 835 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 HAUS1Q96CS2 278 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 SLC12A6Q9UHW9 1150 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 M0R2C6 588 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 PDCLQ13371 301 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 CUL4BQ13620 913 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 SLFN12LQ6IEE8 588 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 PSMB7Q99436 277 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 GGA3Q9NZ52 723 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 SLC8A2Q9UPR5 921 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 QRICH2Q9H0J4 1663 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 PRPF3O43395 683 aaKnown RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 CELF2O95319 508 aaKnown RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 SFNP31947 248 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 GGCXP38435 758 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 FCGRTP55899 365 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 RNASE9P60153 205 aaKnown RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 TNFAIP2Q03169 654 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 ALX1Q15699 326 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 FAM26FQ5R3K3 315 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 FBXW10Q5XX13 1052 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 APLFQ8IW19 511 aaPredicted RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 C7orf31Q8N865 590 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 ACCSQ96QU6 501 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 ARMCX3Q9UH62 379 aaPredicted RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 HNRNPDLO14979 420 aaKnown RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 CTNND1O60716 968 aaKnown RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 IFNAR1P17181 557 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 DDIT3P35638 169 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 STRBPQ96SI9 672 aaKnown RBP11.32□□□□□ -0.6
COL25A1-209ENST00000622134 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
COL25A1-209ENST00000622134 HGSO14964 777 aaPredicted RBP11.31□□□□□ -0.6
COL25A1-209ENST00000622134 PDE1CQ14123 709 aaPredicted RBP11.31□□□□□ -0.6
COL25A1-209ENST00000622134 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
COL25A1-209ENST00000622134 SH3RF3Q8TEJ3 882 aaPredicted RBP11.31□□□□□ -0.6
COL25A1-209ENST00000622134 ANO3Q9BYT9 981 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 PFDN6O15212 129 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 ARL1P40616 181 aaPredicted RBP11.31□□□□□ -0.6
COL25A1-209ENST00000622134 TECP42680 631 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 PLA2G4AP47712 749 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 ELMOD1Q8N336 334 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
COL25A1-209ENST00000622134 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 CASP14P31944 242 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 COG1Q8WTW3 980 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 HNRNPLLQ8WVV9 542 aaKnown RBP11.31□□□□□ -0.6
COL25A1-209ENST00000622134 NELFBQ8WX92 580 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 POMGNT1Q8WZA1 660 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 PIGSQ96S52 555 aa11.31□□□□□ -0.6
COL25A1-209ENST00000622134 ZBTB5O15062 677 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 RPLP2P05387 115 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 PRDX5P30044 214 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 PHKA2P46019 1235 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 EIF3BP55884 814 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 CUL3Q13618 768 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 CATSPER4Q7RTX7 472 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 RUBCNQ92622 972 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 TRIM31Q9BZY9 425 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 L2HGDHQ9H9P8 463 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 PANK4Q9NVE7 773 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 PREX1Q8TCU6 1659 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 TMEM110-MUSTN1A8MSY1 372 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ZBBXA8MT70 800 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 ANGEL2Q5VTE6 544 aaKnown RBP11.3□□□□□ -0.6
COL25A1-209ENST00000622134 TUBB6Q9BUF5 446 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 TEX13BQ9BXU2 312 aa11.3□□□□□ -0.6
COL25A1-209ENST00000622134 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms