RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 UFL1O94874 794 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 KIF4AO95239 1232 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 LDHCP07864 332 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 ABCB4P21439 1286 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 COBLL1Q53SF7 1204 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 AJAP1Q9UKB5 411 aaPredicted RBP17.26■□□□□ 0.35
NPHP4-211ENST00000622020 KIAA1551Q9HCM1 1747 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 KCNA1Q09470 495 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 PDIA5Q14554 519 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 QPCTQ16769 361 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 FAM98CQ17RN3 349 aaKnown RBP17.26■□□□□ 0.35
NPHP4-211ENST00000622020 SPRED3Q2MJR0 410 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 TMEM119Q4V9L6 283 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 DAAM2Q86T65 1068 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 CCDC65Q8IXS2 484 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 PCDHB13Q9Y5F0 798 aa17.26■□□□□ 0.35
NPHP4-211ENST00000622020 TNFRSF8P28908 595 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 CASP4P49662 377 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 PSMD2Q13200 908 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 PEX26Q7Z412 305 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 UHMK1Q8TAS1 419 aaKnown RBP17.25■□□□□ 0.35
NPHP4-211ENST00000622020 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
NPHP4-211ENST00000622020 MDM1Q8TC05 714 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 PSTPIP2Q9H939 334 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
NPHP4-211ENST00000622020 FAM196BA6NMK8 535 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 CETN3O15182 167 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 MED24O75448 989 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 UCHL3P15374 230 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 ECHS1P30084 290 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 RFC4P35249 363 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 ZNF804AQ7Z570 1209 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 PROM2Q8N271 834 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 WHAMMQ8TF30 809 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 U2AF1L4Q8WU68 220 aaKnown RBP17.25■□□□□ 0.35
NPHP4-211ENST00000622020 TRIM51Q9BSJ1 452 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 GOPCQ9HD26 462 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 SEPT11Q9NVA2 429 aaKnown RBP17.25■□□□□ 0.35
NPHP4-211ENST00000622020 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 RNF14Q9UBS8 474 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 NR2E1Q9Y466 385 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
NPHP4-211ENST00000622020 SPATA31A1Q5TZJ5 1347 aa17.25■□□□□ 0.35
NPHP4-211ENST00000622020 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 RSPH10B2B2RC85 870 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 RSPH10BP0C881 870 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 IRF2BP2Q7Z5L9 587 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 NCAPGQ9BPX3 1015 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 GANQ9H2C0 597 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 OSGEPQ9NPF4 335 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 CNOT8Q9UFF9 292 aaKnown RBP17.24■□□□□ 0.35
NPHP4-211ENST00000622020 CYP11B2P19099 503 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 PPP4CP60510 307 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 GPSM2P81274 684 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 ACTN3Q08043 901 aaPredicted RBP17.24■□□□□ 0.35
NPHP4-211ENST00000622020 ZNF844Q08AG5 666 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 SHROOM1Q2M3G4 852 aaPredicted RBP17.24■□□□□ 0.35
NPHP4-211ENST00000622020 MYCBPQ99417 103 aaPredicted RBP17.24■□□□□ 0.35
NPHP4-211ENST00000622020 TMBIM4Q9HC24 238 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 CD209Q9NNX6 404 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 NAGPAQ9UK23 515 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
NPHP4-211ENST00000622020 PHF20L1A8MW92 1017 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 GFPT2O94808 682 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 MYBP10242 640 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 SUGP1Q8IWZ8 645 aaKnown RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 RUBCNQ92622 972 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 CYFIP2Q96F07 1278 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 KCTD10Q9H3F6 313 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 ARMCX3Q9UH62 379 aaPredicted RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 ATP8A1Q9Y2Q0 1164 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 TLDC2A0PJX2 215 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 FNTAP49354 379 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 MAGOHP61326 146 aaKnown RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 ZNF211Q13398 564 aaPredicted RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 LLGL1Q15334 1064 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 EXOC3L4Q17RC7 722 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 ARSHQ5FYA8 562 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 KSR1Q8IVT5 923 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 MAGOHBQ96A72 148 aaKnown RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 NUCKS1Q9H1E3 243 aaKnown RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■■ 125.4
NPHP4-211ENST00000622020 ABCB11O95342 1321 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 DHX9Q08211 1270 aaKnown RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 KRT71Q3SY84 523 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 PRR16Q569H4 304 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 SFR1Q86XK3 245 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 CUL5Q93034 780 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 CABS1Q96KC9 395 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 EDEM3Q9BZQ6 932 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 CHORDC1Q9UHD1 332 aaPredicted RBP17.23■□□□□ 0.35
NPHP4-211ENST00000622020 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
NPHP4-211ENST00000622020 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
NPHP4-211ENST00000622020 GOLGA6L7A0A1B0GV03 622 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms