RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TUBBP07437 444 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.69
FAM3A-222ENST00000621967 MTIF2P46199 727 aaKnown RBP19.33■□□□□ 0.69
FAM3A-222ENST00000621967 KLK7P49862 253 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 MOGSQ13724 837 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 PDIA5Q14554 519 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 BTNL9Q6UXG8 535 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 EHBP1Q8NDI1 1231 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 BRI3BPQ8WY22 251 aa19.33■□□□□ 0.69
FAM3A-222ENST00000621967 PLA2G6O60733 806 aa19.33■□□□□ 0.68
FAM3A-222ENST00000621967 IRX3P78415 501 aaPredicted RBP19.33■□□□□ 0.68
FAM3A-222ENST00000621967 TMEM266Q2M3C6 531 aa19.33■□□□□ 0.68
FAM3A-222ENST00000621967 PAPD7Q5XG87 772 aaKnown RBP19.33■□□□□ 0.68
FAM3A-222ENST00000621967 CATSPERGQ6ZRH7 1159 aa19.33■□□□□ 0.68
FAM3A-222ENST00000621967 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.68
FAM3A-222ENST00000621967 LARP4BQ92615 738 aaKnown RBP19.33■□□□□ 0.68
FAM3A-222ENST00000621967 COA7Q96BR5 231 aa19.33■□□□□ 0.68
FAM3A-222ENST00000621967 ZNHIT6Q9NWK9 470 aaKnown RBP19.33■□□□□ 0.68
FAM3A-222ENST00000621967 ERLIN1O75477 346 aa19.32■□□□□ 0.68
FAM3A-222ENST00000621967 TDP2O95551 362 aa19.32■□□□□ 0.68
FAM3A-222ENST00000621967 HNRNPH3P31942 346 aaKnown RBP19.32■□□□□ 0.68
FAM3A-222ENST00000621967 MCM6Q14566 821 aa19.32■□□□□ 0.68
FAM3A-222ENST00000621967 CCDC122Q5T0U0 273 aa19.32■□□□□ 0.68
FAM3A-222ENST00000621967 FOXR2Q6PJQ5 311 aa19.32■□□□□ 0.68
FAM3A-222ENST00000621967 GUF1Q8N442 669 aaKnown RBP19.32■□□□□ 0.68
FAM3A-222ENST00000621967 PRPF38AQ8NAV1 312 aaKnown RBP19.32■□□□□ 0.68
FAM3A-222ENST00000621967 CAPNS2Q96L46 248 aa19.32■□□□□ 0.68
FAM3A-222ENST00000621967 PURBQ96QR8 312 aaKnown RBP19.32■□□□□ 0.68
FAM3A-222ENST00000621967 NHEJ1Q9H9Q4 299 aaPredicted RBP19.32■□□□□ 0.68
FAM3A-222ENST00000621967 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.32■□□□□ 0.68
FAM3A-222ENST00000621967 PRR12Q9ULL5 1215 aa19.32■□□□□ 0.68
FAM3A-222ENST00000621967 KRT86O43790 486 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 CLK2P49760 499 aaKnown RBP19.31■□□□□ 0.68
FAM3A-222ENST00000621967 EHHADHQ08426 723 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 TMEM119Q4V9L6 283 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 FKBP15Q5T1M5 1219 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 PPP4R3AQ6IN85 833 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 NOA1Q8NC60 698 aaKnown RBP19.31■□□□□ 0.68
FAM3A-222ENST00000621967 RAD54LQ92698 747 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 HPS3Q969F9 1004 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 JAKMIP2Q96AA8 810 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 EEF2KMTQ96G04 330 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 RAB34Q9BZG1 259 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 JMJD4Q9H9V9 463 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 SLC39A2Q9NP94 309 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 RIC8AQ9NPQ8 531 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 PPP1R9AQ9ULJ8 1098 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 L1RE1Q9UN81 338 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 NKRFO15226 690 aaKnown RBP eCLIP19.31■□□□□ 0.68
FAM3A-222ENST00000621967 OSBPP22059 807 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 SREBF2Q12772 1141 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 NOGQ13253 232 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 COG2Q14746 738 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 NCAPH2Q6IBW4 605 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 GPAT2Q6NUI2 795 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 PNMA3Q9UL41 463 aa19.31■□□□□ 0.68
FAM3A-222ENST00000621967 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
FAM3A-222ENST00000621967 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 BTBD19C9JJ37 291 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 VSNL1P62760 191 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 WDR93Q6P2C0 686 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 HDXQ7Z353 690 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 ANKRD23Q86SG2 305 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 KIAA1328Q86T90 577 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 GBP3Q9H0R5 595 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 SIK3Q9Y2K2 1263 aa19.3■□□□□ 0.68
FAM3A-222ENST00000621967 RCCD1A6NED2 376 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 POTEMA6NI47 508 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 POLR3GO15318 223 aaPredicted RBP19.29■□□□□ 0.68
FAM3A-222ENST00000621967 ATP1A1P05023 1023 aaKnown RBP19.29■□□□□ 0.68
FAM3A-222ENST00000621967 RHOXF2BP0C7M4 288 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 INHBEP58166 350 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 HTRA3P83110 453 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 LRRC63Q05C16 580 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 CDC37Q16543 378 aaPredicted RBP19.29■□□□□ 0.68
FAM3A-222ENST00000621967 CDK5RAP3Q96JB5 506 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 RHOXF2Q9BQY4 288 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 LACRTQ9GZZ8 138 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 ASCC2Q9H1I8 757 aaPredicted RBP19.29■□□□□ 0.68
FAM3A-222ENST00000621967 ABCB6Q9NP58 842 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 TFR2Q9UP52 801 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 PLAGL2Q9UPG8 496 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 SAR1BQ9Y6B6 198 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 ANO9A1A5B4 782 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 TESPA1A2RU30 521 aaPredicted RBP19.29■□□□□ 0.68
FAM3A-222ENST00000621967 PDHXO00330 501 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 PPP1R11O60927 126 aaPredicted RBP19.29■□□□□ 0.68
FAM3A-222ENST00000621967 DSG3P32926 999 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 PSMD2Q13200 908 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 MAN2A1Q16706 1144 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 VWA3BQ502W6 1294 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 TAF3Q5VWG9 929 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 ATG4CQ96DT6 458 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 LRRC27Q9C0I9 530 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 SLC45A1Q9Y2W3 748 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 PARP14Q460N5 1801 aa19.29■□□□□ 0.68
FAM3A-222ENST00000621967 H3BQF6 201 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 ZBTB5O15062 677 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms