RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KNG1P01042 644 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 KCNA6P17658 529 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 LACTBP83111 547 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-229ENST00000621897 SQSTM1Q13501 440 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 SMAD2Q15796 467 aaKnown RBP6.71□□□□□ -1.34
BRCA1-229ENST00000621897 CRY1Q16526 586 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 TM4SF20Q53R12 229 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 FAM47CQ5HY64 1035 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 ABHD17CQ6PCB6 329 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 FAM124AQ86V42 546 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 MAGEB10Q96LZ2 347 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-229ENST00000621897 RBM15Q96T37 977 aaKnown RBP eCLIP6.71□□□□□ -1.34
BRCA1-229ENST00000621897 TACO1Q9BSH4 297 aaKnown RBP6.71□□□□□ -1.34
BRCA1-229ENST00000621897 MRPL4Q9BYD3 311 aaKnown RBP6.71□□□□□ -1.34
BRCA1-229ENST00000621897 NCOA5Q9HCD5 579 aaKnown RBP6.71□□□□□ -1.34
BRCA1-229ENST00000621897 FTSJ1Q9UET6 329 aa6.71□□□□□ -1.34
BRCA1-229ENST00000621897 KCNQ2O43526 872 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 FBXO21O94952 628 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 C4BPAP04003 597 aaKnown RBP6.7□□□□□ -1.34
BRCA1-229ENST00000621897 NFE2L2Q16236 605 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 ERICH6BQ5W0A0 696 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 CPZQ66K79 652 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 PKN3Q6P5Z2 889 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 BORAQ6PGQ7 559 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 PRRT2Q7Z6L0 340 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-229ENST00000621897 IGDCC4Q8TDY8 1250 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 ZSWIM4Q9H7M6 989 aa6.7□□□□□ -1.34
BRCA1-229ENST00000621897 CCDC163A0A0D9SF12 145 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 TCRBV16S1A1N1A0A5B0 115 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 GSTA4O15217 222 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 RAPGEF3O95398 923 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 PLATP00750 562 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 ITGB3P05106 788 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 MC4RP32245 332 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 NFATC3Q12968 1075 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 HHIPL2Q6UWX4 724 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 OVCH1Q7RTY7 1134 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 NOSTRINQ8IVI9 506 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 KLHL36Q8N4N3 616 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 CLUHP3Q96NS8 147 aa6.69□□□□□ -1.34
BRCA1-229ENST00000621897 SSBP3Q9BWW4 388 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-229ENST00000621897 CELF4Q9BZC1 486 aaKnown RBP6.69□□□□□ -1.34
BRCA1-229ENST00000621897 PRAMEF25A6NGN4 478 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 K7ESM1 405 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 CLASP2O75122 1294 aaKnown RBP6.68□□□□□ -1.34
BRCA1-229ENST00000621897 NFKB2Q00653 900 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 CCDC144BQ3MJ40 725 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 KBTBD2Q8IY47 623 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 SH3TC2Q8TF17 1288 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 UBXN4Q92575 508 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 PIF1Q9H611 641 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 BTBD7Q9P203 1132 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 ZDHHC9Q9Y397 364 aa6.68□□□□□ -1.34
BRCA1-229ENST00000621897 SCDO00767 359 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 PLD2O14939 933 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 AOAHP28039 575 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 GJA4P35212 333 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 EP400NLQ6ZTU2 488 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 Q6ZUG5 572 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 GPR155Q7Z3F1 870 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 IGSF22Q8N9C0 903 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 MRFAP1L1Q96HT8 127 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 ARHGAP28Q9P2N2 729 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 ADAM29Q9UKF5 820 aa6.67□□□□□ -1.34
BRCA1-229ENST00000621897 LAMTOR5O43504 91 aa6.66□□□□□ -1.34
BRCA1-229ENST00000621897 CHGBP05060 677 aa6.66□□□□□ -1.34
BRCA1-229ENST00000621897 MMEP08473 750 aa6.66□□□□□ -1.34
BRCA1-229ENST00000621897 PTPN18Q99952 460 aa6.66□□□□□ -1.34
BRCA1-229ENST00000621897 BARX1Q9HBU1 254 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-229ENST00000621897 PPP4R1LQ9P1A2 415 aa6.66□□□□□ -1.34
BRCA1-229ENST00000621897 ZNF536O15090 1300 aa6.66□□□□□ -1.34
BRCA1-229ENST00000621897 RASSF10A6NK89 507 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 H0Y858 1186 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 B4GALT4O60513 344 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 MPIG6BO95866 241 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 PTGS1P23219 599 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 CSF2RBP32927 897 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 SPATS1Q496A3 300 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 TMEM177Q53S58 311 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 NPM2Q86SE8 214 aaKnown RBP6.65□□□□□ -1.34
BRCA1-229ENST00000621897 AJUBAQ96IF1 538 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 AMNQ9BXJ7 453 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 CNOT11Q9UKZ1 510 aaKnown RBP6.65□□□□□ -1.34
BRCA1-229ENST00000621897 PTPN22Q9Y2R2 807 aa6.65□□□□□ -1.34
BRCA1-229ENST00000621897 PPP1R12AO14974 1030 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-229ENST00000621897 DNAJC8O75937 253 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-229ENST00000621897 ZNF888P0CJ79 500 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-229ENST00000621897 HERVK_113P62684 666 aa6.64□□□□□ -1.35
BRCA1-229ENST00000621897 IL13RA1P78552 427 aa6.64□□□□□ -1.35
BRCA1-229ENST00000621897 LRSAM1Q6UWE0 723 aa6.64□□□□□ -1.35
BRCA1-229ENST00000621897 PLEKHH3Q7Z736 793 aa6.64□□□□□ -1.35
BRCA1-229ENST00000621897 DLG3Q92796 817 aa6.64□□□□□ -1.35
BRCA1-229ENST00000621897 KATNBL1Q9H079 304 aa6.64□□□□□ -1.35
BRCA1-229ENST00000621897 INCENPQ9NQS7 918 aa6.64□□□□□ -1.35
BRCA1-229ENST00000621897 ESYT3A0FGR9 886 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 MECP2P51608 486 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms