RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 STK4Q13043 487 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 DGKHQ86XP1 1220 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 C10orf67Q8IYJ2 551 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 CCDC155Q8N6L0 562 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 U2AF1L4Q8WU68 220 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 P2RX5Q93086 422 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 LACRTQ9GZZ8 138 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 SLC5A4Q9NY91 659 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 ECE2O60344 883 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 SLC4A1P02730 911 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 FGRP09769 529 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 CRKP46108 304 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 SLC9C1Q4G0N8 1177 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 FAM83BQ5T0W9 1011 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 ANKRD40Q6AI12 368 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 OTUD6AQ7L8S5 288 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 TMC4Q7Z404 712 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 HNRNPLLQ8WVV9 542 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 ADPGKQ9BRR6 497 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 THAP9Q9H5L6 903 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 RAB21Q9UL25 225 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 CAPN11Q9UMQ6 739 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 GOLGA8IPA6NC78 632 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 SPDYE16A6NNV3 312 aaPredicted RBP9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 TMEM191BP0C7N4 346 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 HERVK_113P62684 666 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 SPDYE2Q495Y8 402 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 C12orf60Q5U649 245 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 ARMC9Q7Z3E5 817 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 C4orf32Q8N8J7 132 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 LINC00116Q8NCU8 138 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 TMEM47Q9BQJ4 181 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 UBXN6Q9BZV1 441 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 ASIC3Q9UHC3 531 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 INPP5FQ9Y2H2 1132 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 DUOX1Q9NRD9 1551 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 TAF1P21675 1872 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 ANKRD36CQ5JPF3 1778 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 LRRIQ3A6PVS8 624 aaPredicted RBP9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 CYTH3O43739 400 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 XRCC5P13010 732 aaKnown RBP9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 PSMC4P43686 418 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 STAT2P52630 851 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 CALCOCO2Q13137 446 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 KIAA1841Q6NSI8 718 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 SLC51AQ86UW1 340 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 UBLCP1Q8WVY7 318 aaPredicted RBP9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 SLC7A3Q8WY07 619 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 FAM204AQ9H8W3 233 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 ARMCX3Q9UH62 379 aaPredicted RBP9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.96
PTPDC1-204ENST00000620992 BUB1O43683 1085 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 ADRA2BP18089 450 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 GPSM2P81274 684 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 C2orf54Q08AI8 447 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 ASIC2Q16515 512 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 ZNF394Q53GI3 561 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 FAM26FQ5R3K3 315 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 WDR59Q6PJI9 974 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 MYOCDQ8IZQ8 938 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 GIMAP8Q8ND71 665 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 FBF1Q8TES7 1133 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 CCDC17Q96LX7 622 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 AP5M1Q9H0R1 490 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 SPON1Q9HCB6 807 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 BARHL2Q9NY43 387 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 EXOC7Q9UPT5 735 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 HSF2BPO75031 334 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 RHOBTB3O94955 611 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 CCNE1P24864 410 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 MAN1A1P33908 653 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 GRM4Q14833 912 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 TTI2Q6NXR4 508 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 DAAM2Q86T65 1068 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 ZBTB8OSQ8IWT0 167 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 RIN2Q8WYP3 895 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 SECISBP2LQ93073 1101 aaKnown RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 DHTKD1Q96HY7 919 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 LZTS2Q9BRK4 669 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 GLT8D2Q9H1C3 349 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 PANK4Q9NVE7 773 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 CICQ96RK0 1608 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 PDS5AQ29RF7 1337 aaKnown RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 A0A1W2PQC6 194 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 STXBP3O00186 592 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 ATP2A1O14983 1001 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 CALUO43852 315 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 DKC1O60832 514 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 PLEKP08567 350 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 ADAM9Q13443 819 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 TSTA3Q13630 321 aaPredicted RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 CTTNQ14247 550 aaKnown RBP9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 KCNB1Q14721 858 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 SBK1Q52WX2 424 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 ZNF365Q70YC5 407 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 TRAPPC11Q7Z392 1133 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 THNSL1Q8IYQ7 743 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms