RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CNOT10Q9H9A5 744 aaKnown RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 TRPV5Q9NQA5 729 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 DLGAP2Q9P1A6 1054 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 CNOT8Q9UFF9 292 aaKnown RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 H0YGN5 161 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 IGF2BP3O00425 579 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS11-207ENST00000620429 NAT1P18440 290 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 GBP1P32455 592 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 ADD2P35612 726 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 SIK1P57059 783 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 GALNTL6Q49A17 601 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 SGMS1Q86VZ5 419 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 PTPRN2Q92932 1015 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 FAM136AQ96C01 138 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 ZNF317Q96PQ6 595 aaPredicted RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 CORO1BQ9BR76 489 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 FAM129AQ9BZQ8 928 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 NFS1Q9Y697 457 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 BACH1O14867 736 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 COBLO75128 1261 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 PDHA1P08559 390 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 KRT16P08779 473 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 IDO1P14902 403 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 IFNAR1P17181 557 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 TCP1P17987 556 aaKnown RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 GSTT1P30711 240 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 CBX3Q13185 183 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 EIF1ADQ8N9N8 165 aaKnown RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 FBF1Q8TES7 1133 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 TIPINQ9BVW5 301 aa11.3□□□□□ -0.6
VPS11-207ENST00000620429 FOXP1Q9H334 677 aaPredicted RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 PAIP2BQ9ULR5 123 aaKnown RBP11.3□□□□□ -0.6
VPS11-207ENST00000620429 ERVV-1B6SEH8 477 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 CDC25AP30304 524 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 PEX5P50542 639 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 PPARAQ07869 468 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 FAM133BQ5BKY9 247 aaKnown RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 SH2D4BQ5SQS7 431 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 PTF1AQ7RTS3 328 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 IFT74Q96LB3 600 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 FAM81BQ96LP2 452 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 RAB17Q9H0T7 212 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 UTP6Q9NYH9 597 aaKnown RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 ZSWIM5Q9P217 1185 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 SCOCQ9UIL1 159 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 A8MUI8 341 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 SMAPO00193 183 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 PDE8BO95263 885 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 GLI1P08151 1106 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 CALB2P22676 271 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 LIFRP42702 1097 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 PRPF4BQ13523 1007 aaKnown RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 MAEAQ7L5Y9 396 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 PHC3Q8NDX5 983 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 EPSTI1Q96J88 318 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 VPS16Q9H269 839 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 LIMA1Q9UHB6 759 aaKnown RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 BARX2Q9UMQ3 279 aaPredicted RBP11.29□□□□□ -0.6
VPS11-207ENST00000620429 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 A0A087X0B3 334 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 CAMTA2O94983 1202 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 VCAM1P19320 739 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 CTDSPL2Q05D32 466 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 RTN1Q16799 776 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 TSNAXIP1Q2TAA8 658 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 ASRGL1Q7L266 308 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 EXOC3L1Q86VI1 746 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 KLHL29Q96CT2 875 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 PAGE5Q96GU1 130 aa11.29□□□□□ -0.6
VPS11-207ENST00000620429 ZNF532Q9HCE3 1301 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 PFDN1O60925 122 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 MRPS25P82663 173 aaKnown RBP11.28□□□□□ -0.6
VPS11-207ENST00000620429 ZNF844Q08AG5 666 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 BNIP1Q12981 228 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 PLS1Q14651 629 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 KRT31Q15323 416 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 STAMQ92783 540 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 HAPLN3Q96S86 360 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 KRT23Q9C075 422 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 LACRTQ9GZZ8 138 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 RNPEPL1Q9HAU8 725 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 EPB41L5Q9HCM4 733 aa11.28□□□□□ -0.6
VPS11-207ENST00000620429 HYOU1Q9Y4L1 999 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms