RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CYFIP2Q96F07 1278 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 CUEDC2Q9H467 287 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 TOMM70O94826 608 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 PAX7P23759 505 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 COG1Q8WTW3 980 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 EDEM3Q9BZQ6 932 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 NCOA5Q9HCD5 579 aaKnown RBP16.09■□□□□ 0.17
COL5A1-208ENST00000618395 ZNF644Q9H582 1327 aaPredicted RBP16.09■□□□□ 0.17
COL5A1-208ENST00000618395 CAV1Q03135 178 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 INPP5AQ14642 412 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 ATP8B4Q8TF62 1192 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 TUBGCP2Q9BSJ2 902 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 PRG3Q9Y2Y8 225 aaPredicted RBP16.09■□□□□ 0.17
COL5A1-208ENST00000618395 GUCY1B2O75343 617 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
COL5A1-208ENST00000618395 R3HDM2Q9Y2K5 976 aaKnown RBP16.09■□□□□ 0.17
COL5A1-208ENST00000618395 NSD2O96028 1365 aa16.08■□□□□ 0.17
COL5A1-208ENST00000618395 PPP1R37O75864 691 aa16.08■□□□□ 0.17
COL5A1-208ENST00000618395 MOCS3O95396 460 aa16.08■□□□□ 0.17
COL5A1-208ENST00000618395 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.17
COL5A1-208ENST00000618395 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.17
COL5A1-208ENST00000618395 GRM8O00222 908 aa16.08■□□□□ 0.17
COL5A1-208ENST00000618395 DYMQ7RTS9 669 aa16.08■□□□□ 0.17
COL5A1-208ENST00000618395 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 MYH11P35749 1972 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 HSPD1P10809 573 aaKnown RBP16.08■□□□□ 0.16
COL5A1-208ENST00000618395 CYB5D1Q6P9G0 228 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 DIS3L2Q8IYB7 885 aaKnown RBP16.08■□□□□ 0.16
COL5A1-208ENST00000618395 TAGAPQ8N103 731 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 TNIP2Q8NFZ5 429 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 NARS2Q96I59 477 aaKnown RBP16.08■□□□□ 0.16
COL5A1-208ENST00000618395 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 ERBB4Q15303 1308 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 MDH1P40925 334 aaKnown RBP16.08■□□□□ 0.16
COL5A1-208ENST00000618395 PCDHB13Q9Y5F0 798 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 RGS20O76081 388 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 PECAM1P16284 738 aaPredicted RBP16.08■□□□□ 0.16
COL5A1-208ENST00000618395 MARK3P27448 753 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 POLR2BP30876 1174 aaKnown RBP16.08■□□□□ 0.16
COL5A1-208ENST00000618395 PDIK1LQ8N165 341 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.16
COL5A1-208ENST00000618395 PCP4L1A6NKN8 68 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 GSPT1P15170 499 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SPDYE2Q495Y8 402 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 ANKRD13CQ8N6S4 541 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 STX7O15400 261 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 MFN2O95140 757 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 LRRC8EQ6NSJ5 796 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SEC16BQ96JE7 1060 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 AURKCQ9UQB9 309 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 EFCAB5A4FU69 1503 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 TXKP42681 527 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 PSMC6P62333 389 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 LSP1P33241 339 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 KRT39Q6A163 491 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 ANGPTL8Q6UXH0 198 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 DIS3Q9Y2L1 958 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 CTIFO43310 598 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 HSPA1AP0DMV8 641 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 HSPA1BP0DMV9 641 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 CCT3P49368 545 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SPATA21Q7Z572 469 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 PARD3BQ8TEW8 1205 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 RPS6KC1Q96S38 1066 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SSH2Q76I76 1423 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 BACH1O14867 736 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 XPO1O14980 1071 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 ADARP55265 1226 aaKnown RBP16.07■□□□□ 0.16
COL5A1-208ENST00000618395 EXOC3L4Q17RC7 722 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 SPATA2Q9UM82 520 aa16.07■□□□□ 0.16
COL5A1-208ENST00000618395 FAM25AB3EWG3 89 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 FAM25CB3EWG5 89 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 FAM25GB3EWG6 89 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 HOXA7P31268 230 aaPredicted RBP16.06■□□□□ 0.16
COL5A1-208ENST00000618395 PRAMEP78395 509 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 SCYL2Q6P3W7 929 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 STKLD1Q8NE28 680 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 NOC2LQ9Y3T9 749 aaKnown RBP16.06■□□□□ 0.16
COL5A1-208ENST00000618395 PCDHA13Q9Y5I0 950 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 SNPHO15079 494 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 TAC1P20366 129 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
COL5A1-208ENST00000618395 C1orf112Q9NSG2 853 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 IPPQ9Y573 584 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 A6NJR5 290 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 TNNI1P19237 187 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 GNL1P36915 607 aaPredicted RBP16.06■□□□□ 0.16
COL5A1-208ENST00000618395 RCSD1Q6JBY9 416 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms