RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 TRPA1O75762 1119 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 ENPP1P22413 925 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 GTF2A2P52657 109 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 DNM1Q05193 864 aaKnown RBP13.32□□□□□ -0.28
SRRT-216ENST00000618262 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 TRPV5Q9NQA5 729 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 BARX2Q9UMQ3 279 aaPredicted RBP13.32□□□□□ -0.28
SRRT-216ENST00000618262 AGTPBP1Q9UPW5 1226 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
SRRT-216ENST00000618262 EIF3FO00303 357 aaPredicted RBP13.32□□□□□ -0.28
SRRT-216ENST00000618262 FIBPO43427 364 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 PGK2P07205 417 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 CETPP11597 493 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 VEGFBP49765 207 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 FKBP1BP68106 108 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 GABPB2Q8TAK5 448 aaPredicted RBP13.32□□□□□ -0.28
SRRT-216ENST00000618262 FAM107BQ9H098 131 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 ZNF536O15090 1300 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 CXCL11O14625 94 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 ADCY1Q08828 1119 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
SRRT-216ENST00000618262 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 AMNQ9BXJ7 453 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 PORCNQ9H237 461 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
SRRT-216ENST00000618262 ERLIN2O94905 339 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 DSG3P32926 999 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 ELF2Q15723 593 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 OLFML1Q6UWY5 402 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 PACS1Q6VY07 963 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
SRRT-216ENST00000618262 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 BARHL2Q9NY43 387 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 ODF2LQ9ULJ1 636 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
SRRT-216ENST00000618262 SYCE3A1L190 88 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 ZBED4O75132 1171 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 RTN3O95197 1032 aaPredicted RBP13.31□□□□□ -0.28
SRRT-216ENST00000618262 ZSCAN22P10073 491 aaPredicted RBP13.31□□□□□ -0.28
SRRT-216ENST00000618262 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRRT-216ENST00000618262 FASTKD5Q7L8L6 764 aaKnown RBP13.31□□□□□ -0.28
SRRT-216ENST00000618262 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 RBPJLQ9UBG7 517 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 PYCARDQ9ULZ3 195 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
SRRT-216ENST00000618262 LAMA2P24043 3122 aaKnown RBP13.31□□□□□ -0.28
SRRT-216ENST00000618262 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 RPS6KA5O75582 802 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 COL19A1Q14993 1142 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 EEPD1Q7L9B9 569 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 REXO1L1PQ8IX06 675 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 ATP11CQ8NB49 1132 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 SLC38A10Q9HBR0 1119 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 EXOC1Q9NV70 894 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 LRRC10BA6NIK2 292 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 MMP1P03956 469 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 STAT3P40763 770 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 SDCCAG8Q86SQ7 713 aaPredicted RBP13.3□□□□□ -0.28
SRRT-216ENST00000618262 KIAA1328Q86T90 577 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 HOXC10Q9NYD6 342 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 SEL1LQ9UBV2 794 aa13.3□□□□□ -0.28
SRRT-216ENST00000618262 OPLAHO14841 1288 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 F13A1P00488 732 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 SLC10A3P09131 477 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 HARSP12081 509 aaKnown RBP13.29□□□□□ -0.28
SRRT-216ENST00000618262 FSTL1Q12841 308 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 AGAP9Q5VTM2 703 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 TRMT1LQ7Z2T5 733 aaKnown RBP13.29□□□□□ -0.28
SRRT-216ENST00000618262 SAAL1Q96ER3 474 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 TSPY26PQ9H489 355 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 RNF146Q9NTX7 359 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 IP6K2Q9UHH9 426 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 ZNF214Q9UL59 606 aaPredicted RBP13.29□□□□□ -0.28
SRRT-216ENST00000618262 MYCP01106 439 aaPredicted RBP13.29□□□□□ -0.28
SRRT-216ENST00000618262 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
SRRT-216ENST00000618262 CRHR2Q13324 411 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 SAFBQ15424 915 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRRT-216ENST00000618262 NPY5RQ15761 445 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 SH3D19Q5HYK7 790 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 ZNF215Q9UL58 517 aaPredicted RBP13.29□□□□□ -0.28
SRRT-216ENST00000618262 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRRT-216ENST00000618262 FAN1Q9Y2M0 1017 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 PTGS1P23219 599 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 CNTN2Q02246 1040 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 ZNF174Q15697 407 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 LETM2Q2VYF4 491 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 KBTBD12Q3ZCT8 623 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 TCP11Q8WWU5 503 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 MAP3K14Q99558 947 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 PHF20Q9BVI0 1012 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 CREBZFQ9NS37 354 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 HDAC6Q9UBN7 1215 aa13.29□□□□□ -0.28
SRRT-216ENST00000618262 GOLGA6L19H0YKK7 550 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 ZBTB48P10074 688 aaPredicted RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 EIF2AK2P19525 551 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms