RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 RDM1Q8NG50 284 aa18.71■□□□□ 0.59
TRAPPC3-210ENST00000617904 BLZF1Q9H2G9 400 aa18.71■□□□□ 0.59
TRAPPC3-210ENST00000617904 HMX1Q9NP08 348 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC3-210ENST00000617904 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
TRAPPC3-210ENST00000617904 RIPK3Q9Y572 518 aa18.71■□□□□ 0.59
TRAPPC3-210ENST00000617904 ALPK3Q96L96 1907 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 LOC102724159A0A0B4J2E5 919 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 PSMA7O14818 248 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 EVI5O60447 810 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 RHOBTB3O94955 611 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 ADCY5O95622 1261 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 SSBP05455 408 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 CYP2B6P20813 491 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 JAK3P52333 1124 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 KRT76Q01546 638 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 PWP2Q15269 919 aaKnown RBP18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 SARM1Q6SZW1 724 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 MIER3Q7Z3K6 550 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 VSIG10LQ86VR7 867 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 ANKLE1Q8NAG6 615 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 GIMAP8Q8ND71 665 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 ENOX1Q8TC92 643 aaKnown RBP18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 STAMQ92783 540 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 PNMA5Q96PV4 448 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 NACC1Q96RE7 527 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 EIF2AK1Q9BQI3 630 aaKnown RBP18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 TRIM9Q9C026 710 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 KCNH7Q9NS40 1196 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 COL20A1Q9P218 1284 aa18.7■□□□□ 0.58
TRAPPC3-210ENST00000617904 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 XRCC5P13010 732 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 CDK11BP21127 795 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 MNX1P50219 401 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 ERVK-9P63128 1117 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 ERVK-24P63145 666 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 PDE4DQ08499 809 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 MAP3K21Q5TCX8 1036 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 UNC13DQ70J99 1090 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 NECAB2Q7Z6G3 386 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 DHX40Q8IX18 779 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 DRC7Q8IY82 874 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 USP6NLQ92738 828 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 CCDC43Q96MW1 224 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 NUDT12Q9BQG2 462 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 PORCNQ9H237 461 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 AGO4Q9HCK5 861 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 VAV3Q9UKW4 847 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 SAMM50Q9Y512 469 aa18.69■□□□□ 0.58
TRAPPC3-210ENST00000617904 EIF3JO75822 258 aaKnown RBP18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 PLA2G4BP0C869 781 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 FCER1AP12319 257 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 ITGB5P18084 799 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 MAPK4P31152 587 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 SPIRE1Q08AE8 756 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 MCM6Q14566 821 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 HS1BP3Q53T59 392 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 CYP2W1Q8TAV3 490 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 SOCS4Q8WXH5 440 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 BTBD7Q9P203 1132 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 A0A0G2JMZ2 1700 aa18.68■□□□□ 0.58
TRAPPC3-210ENST00000617904 RLFQ13129 1914 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 POTEB3A0JP26 581 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 CHMP2AO43633 222 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 CNMDO75829 334 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 P4HBP07237 508 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 ARP10275 920 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 PAK1Q13153 545 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 KMT5BQ4FZB7 885 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 MORN1Q5T089 497 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 KCNV1Q6PIU1 500 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 POTEBQ6S5H4 581 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 GPR142Q7Z601 462 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 NOC3LQ8WTT2 800 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 DHTKD1Q96HY7 919 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 PDLIM2Q96JY6 352 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 MMP19Q99542 508 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 MOV10L1Q9BXT6 1211 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 BLOC1S4Q9NUP1 217 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 KCND2Q9NZV8 630 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 RWDD2AQ9UIY3 292 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 OGDHLQ9ULD0 1010 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 SYNRGQ9UMZ2 1314 aa18.67■□□□□ 0.58
TRAPPC3-210ENST00000617904 WDR64B1ANS9 1081 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 EYA4O95677 639 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 FGFR1OPO95684 399 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 SERPINC1P01008 464 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 TPM2P07951 284 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 PRKAR2AP13861 404 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 IDEP14735 1019 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 ERCC3P19447 782 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 MRPS9P82933 396 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 SPAG1Q07617 926 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 WDR78Q5VTH9 848 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 SPATA1Q5VX52 437 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 GPBP1Q86WP2 473 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 TPH2Q8IWU9 490 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 SMAP1Q8IYB5 467 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms