RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 ARHGAP27Q6ZUM4 889 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 SMCR8Q8TEV9 937 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 CCDC51Q96ER9 411 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 NDST4Q9H3R1 872 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 WRAP73Q9P2S5 460 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 PLA2G6O60733 806 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 PRPF6O94906 941 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 MYBP10242 640 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 CCDC40Q4G0X9 1142 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 FKBP15Q5T1M5 1219 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 TMTC1Q8IUR5 882 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 OR8K1Q8NGG5 319 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 WDR11Q9BZH6 1224 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 KIAA1683Q9H0B3 1180 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 IKZF4Q9H2S9 585 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 UNC45AQ9H3U1 944 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 CTDP1Q9Y5B0 961 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-212ENST00000616701 SLITRK3O94933 977 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 ITGB5P18084 799 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 EIF2AK2P19525 551 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 CAPN11Q9UMQ6 739 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 CASQ1P31415 396 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 EPS15P42566 896 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 SLC5A5Q92911 643 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 GGA3Q9NZ52 723 aa17.21■□□□□ 0.35
SEMA3B-212ENST00000616701 SLU7O95391 586 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 ZCWPW2Q504Y3 356 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 NSMFQ6X4W1 530 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 TRIM10Q9UDY6 481 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 HMGCS2P54868 508 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 KCNA1Q09470 495 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 TAAR1Q96RJ0 339 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 HSD17B14Q9BPX1 270 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 EHMT1Q9H9B1 1298 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 PHLPP2Q6ZVD8 1323 aa17.2■□□□□ 0.34
SEMA3B-212ENST00000616701 IPO5O00410 1097 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 MYCLP12524 364 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 APBA1Q02410 837 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 MAN2A1Q16706 1144 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 TSR1Q2NL82 804 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 LPAR1Q92633 364 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 SH2D3AQ9BRG2 576 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 CRACR2AQ9BSW2 395 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 POLR3CQ9BUI4 534 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 TTYH3Q9C0H2 523 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 SLC38A10Q9HBR0 1119 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 SH3BP1Q9Y3L3 701 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 FKBP3Q00688 224 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 ELF2Q15723 593 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 PPP1R9AQ9ULJ8 1098 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 RIPK3Q9Y572 518 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 HSD17B4P51659 736 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 HIRAP54198 1017 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 ARHGAP29Q52LW3 1261 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 RINT1Q6NUQ1 792 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 KRT222Q8N1A0 295 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 MXRA8Q9BRK3 442 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 KCTD10Q9H3F6 313 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 COL4A3BPQ9Y5P4 624 aa17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-212ENST00000616701 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 GOLGA6L9A6NEM1 432 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 EYA4O95677 639 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 FGFR1OPO95684 399 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 FECHP22830 423 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 RPS6P62753 249 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 ZNF569Q5MCW4 686 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 SYTL5Q8TDW5 730 aaPredicted RBP17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 DNAJC7Q99615 494 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 L2HGDHQ9H9P8 463 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 PICK1Q9NRD5 415 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 KCNH7Q9NS40 1196 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 REXO2Q9Y3B8 237 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 TBCAO75347 108 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 GCNT3O95395 438 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 PLEKP08567 350 aaPredicted RBP17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 HOXD13P35453 343 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 ADAM9Q13443 819 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 CARD6Q9BX69 1037 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 TEKT3Q9BXF9 490 aa17.18■□□□□ 0.34
SEMA3B-212ENST00000616701 NDUFA10O95299 355 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 PTPRAP18433 802 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 PPP2R5CQ13362 524 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 ERCC6LQ2NKX8 1250 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 ERGIC2Q96RQ1 377 aa17.17■□□□□ 0.34
SEMA3B-212ENST00000616701 PITPNM2Q9BZ72 1349 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms