RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 PP2D1A8MPX8 630 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 KPNA6O60684 536 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 LGR5O75473 907 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 HSPA8P11142 646 aaKnown RBP13.04□□□□□ -0.32
TARDBP-217ENST00000616545 HOXD8P13378 290 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-217ENST00000616545 CDC25AP30304 524 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 GRB10Q13322 594 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 KARSQ15046 597 aaKnown RBP13.04□□□□□ -0.32
TARDBP-217ENST00000616545 E2F4Q16254 413 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 PLPPR4Q7Z2D5 763 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 CTU1Q7Z7A3 348 aaKnown RBP13.04□□□□□ -0.32
TARDBP-217ENST00000616545 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 OR6J1Q8NGC5 347 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 FAM167AQ96KS9 214 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 SMARCAD1Q9H4L7 1026 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 TSKSQ9UJT2 592 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 MAFBQ9Y5Q3 323 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-217ENST00000616545 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
TARDBP-217ENST00000616545 GSTTP1A0A1W2PQM5 241 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 A6NJR5 290 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 MED24O75448 989 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 RARBP10826 455 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
TARDBP-217ENST00000616545 PLCG1P19174 1290 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 TCF7P36402 384 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-217ENST00000616545 CPT1AP50416 773 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 STAT5BP51692 787 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 DGKDQ16760 1214 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 PRAMEF19Q5SWL8 479 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 CCDC183Q5T5S1 534 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 TPH2Q8IWU9 490 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 PDILTQ8N807 584 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 RAD54LQ92698 747 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 DHX58Q96C10 678 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 DYDC2Q96IM9 177 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 UIMC1Q96RL1 719 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 LXNQ9BS40 222 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 TNMDQ9H2S6 317 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 CLSTN2Q9H4D0 955 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-217ENST00000616545 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 ANKEF1Q9NU02 776 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 KCND2Q9NZV8 630 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 DBR1Q9UK59 544 aaKnown RBP13.03□□□□□ -0.32
TARDBP-217ENST00000616545 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 IGSF9BQ9UPX0 1349 aa13.03□□□□□ -0.32
TARDBP-217ENST00000616545 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 POTEB3A0JP26 581 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 BACH1O14867 736 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 FOXN1O15353 648 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 ACTN4O43707 911 aaKnown RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 ZEB2O60315 1214 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 EYA4O95677 639 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 HSPA1AP0DMV8 641 aaKnown RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 HSPA1BP0DMV9 641 aaKnown RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 ELNP15502 786 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 CAPN2P17655 700 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 GJA9P57773 515 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 LONRF3Q496Y0 759 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 TPRNQ4KMQ1 711 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 XKR3Q5GH77 459 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 SWSAP1Q6NVH7 229 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 CNNM4Q6P4Q7 775 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 POTEBQ6S5H4 581 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 TLK2Q86UE8 772 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 EXOC8Q8IYI6 725 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 TRPV1Q8NER1 839 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 LARP4BQ92615 738 aaKnown RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 NRBP2Q9NSY0 501 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 KBTBD4Q9NVX7 518 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 RGL1Q9NZL6 768 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 ZNF215Q9UL58 517 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-217ENST00000616545 PTCH2Q9Y6C5 1203 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 ZSWIM8A7E2V4 1837 aa13.02□□□□□ -0.33
TARDBP-217ENST00000616545 A0A087X0B3 334 aa13.01□□□□□ -0.33
TARDBP-217ENST00000616545 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-217ENST00000616545 INHAP05111 366 aa13.01□□□□□ -0.33
TARDBP-217ENST00000616545 CNGA1P29973 690 aa13.01□□□□□ -0.33
TARDBP-217ENST00000616545 CYP4A11Q02928 519 aa13.01□□□□□ -0.33
TARDBP-217ENST00000616545 CTTNQ14247 550 aaKnown RBP13.01□□□□□ -0.33
TARDBP-217ENST00000616545 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
TARDBP-217ENST00000616545 FBXO46Q6PJ61 603 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-217ENST00000616545 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
TARDBP-217ENST00000616545 CCDC60Q8IWA6 550 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-217ENST00000616545 SYT2Q8N9I0 419 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-217ENST00000616545 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
TARDBP-217ENST00000616545 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
TARDBP-217ENST00000616545 COPS5Q92905 334 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms