RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NCK2O43639 380 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 GAP43P17677 238 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 GJC1P36383 396 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 TYW1Q9NV66 732 aaKnown RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 ZNF446Q9NWS9 450 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 PDXKO00764 312 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 C21orf2O43822 256 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 PPFIA4O75335 1185 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 UCHL3P15374 230 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 PDXDC1Q6P996 788 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 CCDC105Q8IYK2 499 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF577Q9BSK1 485 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 LRRC1Q9BTT6 524 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 KDM4FA0A1W2PPD8 638 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 HNRNPDLO14979 420 aaKnown RBP6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 GAS8O95995 478 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 ABL1P00519 1130 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 C2orf54Q08AI8 447 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLC30A10Q6XR72 485 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 CCNI2Q6ZMN8 369 aaPredicted RBP6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 NIM1KQ8IY84 436 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 GSPT2Q8IYD1 628 aaKnown RBP6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 ASIC3Q9UHC3 531 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 RASAL2Q9UJF2 1139 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 PEAK1Q9H792 1746 aa6.15□□□□□ -1.43
SYNCRIP-204ENST00000616122 K7ENM7 598 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MYO1CO00159 1063 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 IPO5O00410 1097 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 IBSPP21815 317 aaPredicted RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 CCT5P48643 541 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 VPS41P49754 854 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 STRIP1Q5VSL9 837 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 APTXQ7Z2E3 356 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 TRIM59Q8IWR1 403 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 KIAA0895Q8NCT3 520 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MSANTD4Q8NCY6 345 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DPF3Q92784 378 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PNMA5Q96PV4 448 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 TEKT3Q9BXF9 490 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 SEMA6BQ9H3T3 888 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PALMO75781 387 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DLATP10515 647 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 KLK7P49862 253 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DDR1Q08345 913 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 HOOK3Q86VS8 718 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 UHMK1Q8TAS1 419 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MAGOHBQ96A72 148 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DDX4Q9NQI0 724 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PITPNM2Q9BZ72 1349 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 A0A0U1RQJ8 604 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 CCDC188H7C350 402 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF185O15231 689 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PBX1P40424 430 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF365Q70YC5 407 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 UBL4BQ8N7F7 174 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 CAPS2Q9BXY5 557 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 GOLPH3Q9H4A6 298 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 FBXO28Q9NVF7 368 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PRR12Q9ULL5 1215 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PACSIN2Q9UNF0 486 aaPredicted RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 KIF20BQ96Q89 1820 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 ITSN1Q15811 1721 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 ABCB11O95342 1321 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 TCHHQ07283 1943 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 TBX3O15119 743 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DKC1O60832 514 aaKnown RBP eCLIP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MYZAPP0CAP1 466 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 NMT1P30419 496 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 APBA1Q02410 837 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLC27A3Q5K4L6 730 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DAAM1Q9Y4D1 1078 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PIK3C2AO00443 1686 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DDTLA6NHG4 134 aaPredicted RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 TM4SF1P30408 202 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 INPP5BP32019 993 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DHX9Q08211 1270 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MESDQ14696 234 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 WDR93Q6P2C0 686 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PRPF38AQ8NAV1 312 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DCAF4Q8WV16 495 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MTMR8Q96EF0 704 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MMTAG2Q9BU76 263 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 SMARCAL1Q9NZC9 954 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 FEZ2Q9UHY8 353 aaPredicted RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 HERC5Q9UII4 1024 aaKnown RBP6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 DNAJC12Q9UKB3 198 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 RAB21Q9UL25 225 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 EXOC7Q9UPT5 735 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MYO9BQ13459 2157 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 KNDC1Q76NI1 1749 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 MYO1FO00160 1098 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 SASH3O75995 380 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 IL1R1P14778 569 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 CD19P15391 556 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 TNNI1P19237 187 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PDCLQ13371 301 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PPP1R7Q15435 360 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 SEL1L2Q5TEA6 688 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 XXYLT1Q8NBI6 393 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 PCIF1Q9H4Z3 704 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms