RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 RAB17Q9H0T7 212 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 STAT1P42224 750 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 DR1Q01658 176 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 UNC13DQ70J99 1090 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 NBPF5PQ86XG9 351 aaPredicted RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 NEK9Q8TD19 979 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 ZNF287Q9HBT7 754 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 RNF14Q9UBS8 474 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 SERPINA10Q9UK55 444 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 SKOR1P84550 965 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 PTK2Q05397 1052 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 TAF11Q15544 211 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 ACCSLQ4AC99 568 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 TMED8Q6PL24 325 aaPredicted RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 LRRC34Q8IZ02 419 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 RNF10Q8N5U6 811 aaKnown RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 METTL13Q8N6R0 699 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 TMEM47Q9BQJ4 181 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 TMBIM4Q9HC24 238 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 CCDC169A6NNP5 214 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 KLRC4O43908 158 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 FSBPO95073 299 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 EPB41P11171 864 aaKnown RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 KLRK1P26718 216 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 MIIPQ5JXC2 388 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 ZNF746Q6NUN9 644 aaPredicted RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 GLYCTKQ8IVS8 523 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 ANKS1AQ92625 1134 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 XPO6Q96QU8 1125 aaKnown RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 KBTBD4Q9NVX7 518 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 CEP72Q9P209 647 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 CCNL1Q9UK58 526 aaPredicted RBP12.81□□□□□ -0.36
CDH5-208ENST00000614547 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
CDH5-208ENST00000614547 DNM1LO00429 736 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 EVI5O60447 810 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 STAT3P40763 770 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
CDH5-208ENST00000614547 ZNF844Q08AG5 666 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 COASYQ13057 564 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 CUL1Q13616 776 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 SLC18A3Q16572 532 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 PRCCQ92733 491 aaPredicted RBP12.8□□□□□ -0.36
CDH5-208ENST00000614547 CAVIN3Q969G5 261 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 CCSER1Q9C0I3 900 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 NUCKS1Q9H1E3 243 aaKnown RBP12.8□□□□□ -0.36
CDH5-208ENST00000614547 NKIRAS1Q9NYS0 192 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 CPSF2Q9P2I0 782 aaKnown RBP12.8□□□□□ -0.36
CDH5-208ENST00000614547 DDX25Q9UHL0 483 aaKnown RBP12.8□□□□□ -0.36
CDH5-208ENST00000614547 ZNF131P52739 623 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 ANKRD20A8PQ5CZ79 823 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 HP1BP3Q5SSJ5 553 aaPredicted RBP12.8□□□□□ -0.36
CDH5-208ENST00000614547 IQCKQ8N0W5 287 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 ARHGEF2Q92974 986 aaKnown RBP12.8□□□□□ -0.36
CDH5-208ENST00000614547 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 PNPLA7Q6ZV29 1317 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 POTECB2RU33 542 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
CDH5-208ENST00000614547 HSPA1LP34931 641 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 RFC4P35249 363 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 USH1GQ495M9 461 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 PPP4R3AQ6IN85 833 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 IFT74Q96LB3 600 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 GCNT4Q9P109 453 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 TCEAL9Q9UHQ7 104 aa12.8□□□□□ -0.36
CDH5-208ENST00000614547 ABCC6O95255 1503 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 C6orf229H3BNL8 230 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 HIP1RO75146 1068 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 FAM13AO94988 1023 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 PLCG2P16885 1265 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 SNAP25P60880 206 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 BIRC3Q13489 604 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 SEL1L2Q5TEA6 688 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 GSTA5Q7RTV2 222 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 AK8Q96MA6 479 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 RASGRF2O14827 1237 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 KCNJ1P48048 391 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 NAB2Q15742 525 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 ERFEQ4G0M1 354 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 PRR16Q569H4 304 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 CYP4F22Q6NT55 531 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDH5-208ENST00000614547 CUEDC2Q9H467 287 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 KIF9Q9HAQ2 790 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 FGFR1OP2Q9NVK5 253 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 TCP11X1B4DZS4 312 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 ZBTB16Q05516 673 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 LRRC63Q05C16 580 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 ITGB3BPQ13352 177 aaPredicted RBP12.79□□□□□ -0.36
CDH5-208ENST00000614547 SETDB1Q15047 1291 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms