RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 CNTNAP4Q9C0A0 1308 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 KIF13BQ9NQT8 1826 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 MED24O75448 989 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 KIF4AO95239 1232 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 ARID5AQ03989 594 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 KCNH2Q12809 1159 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 FAM26FQ5R3K3 315 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 KLHL7Q8IXQ5 586 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 EIF1ADQ8N9N8 165 aaKnown RBP8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 ATP8B4Q8TF62 1192 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 CCDC47Q96A33 483 aaKnown RBP8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 SYT11Q9BT88 431 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 NAGPAQ9UK23 515 aa8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 GREB1LQ9C091 1923 aaPredicted RBP8.17□□□□□ -1.1
PPARGC1A-217ENST00000613098 RGL2O15211 777 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 FAM107AO95990 144 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 PON1P27169 355 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 TMOD1P28289 359 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 RFC4P35249 363 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDR1Q08345 913 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SPTY2D1Q68D10 685 aaPredicted RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 CCDC70Q6NSX1 233 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 C15orf52Q6ZUT6 534 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 TPCN2Q8NHX9 752 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 BORCS6Q96GS4 357 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 KCNMB3Q9NPA1 279 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDX20Q9UHI6 824 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 CAPN7Q9Y6W3 813 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SPATA31A5Q5VU36 1347 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SPATA31A7Q8IWB4 1347 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 POTEB3A0JP26 581 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SHTN1A0MZ66 631 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 POTECB2RU33 542 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 TRAPPC3O43617 180 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 AKR1B1P15121 316 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 UCHL3P15374 230 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 ACTN3Q08043 901 aaPredicted RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 CEP85LQ5SZL2 805 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 POTEBQ6S5H4 581 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 ADGRF4Q8IZF3 695 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 LRRC47Q8N1G4 583 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SLC30A5Q8TAD4 765 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 THRAP3Q9Y2W1 955 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 MYH4Q9Y623 1939 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 GAKO14976 1311 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 A0A0G2JS52 829 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 C5orf60A6NFR6 353 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SRRM3A6NNA2 597 aaPredicted RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 F8W031 263 aaPredicted RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDX3XO00571 662 aaKnown RBP eCLIP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 KCNK3O14649 394 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 BACH1O14867 736 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 AKAP3O75969 853 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 SPATA31C1P0DKV0 1188 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 STAT3P40763 770 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 ADCY7P51828 1080 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 KCNA1Q09470 495 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 KLHL30Q0D2K2 578 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 RAPGEF1Q13905 1077 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 EPHA7Q15375 998 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 GJB7Q6PEY0 223 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 LRIG3Q6UXM1 1119 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 CYFIP2Q96F07 1278 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 MBOAT7Q96N66 472 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 TANGO6Q9C0B7 1094 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 GPR88Q9GZN0 384 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 FAM107BQ9H098 131 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDX47Q9H0S4 455 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 VCPKMTQ9H867 229 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDX4Q9NQI0 724 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 GEMIN8Q9NWZ8 242 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDX25Q9UHL0 483 aaKnown RBP8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 GGA2Q9UJY4 613 aa8.16□□□□□ -1.1
PPARGC1A-217ENST00000613098 LTBP1Q14766 1721 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 IGSF9BQ9UPX0 1349 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 HMGB1P1B2RPK0 211 aaPredicted RBP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 FGFR1OPO95684 399 aaKnown RBP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 PAEPP09466 180 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 PLA2G4BP0C869 781 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 IL1R1P14778 569 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 PRKCIP41743 596 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 GPSM2P81274 684 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 GIT2Q14161 759 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 ENOX2Q16206 610 aaKnown RBP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 KRT79Q5XKE5 535 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 NT5DC3Q86UY8 548 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 CCDC13Q8IYE1 715 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 LNX1Q8TBB1 728 aaPredicted RBP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 LENG9Q96B70 501 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 HES6Q96HZ4 224 aa8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 CELF4Q9BZC1 486 aaKnown RBP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
PPARGC1A-217ENST00000613098 ADAM7Q9H2U9 754 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms