RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 ELAC2Q9BQ52 826 aaKnown RBP18.1■□□□□ 0.49
TSKU-205ENST00000612930 EPB41L4BQ9H329 900 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 ABCF3Q9NUQ8 709 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 AIPL1Q9NZN9 384 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 AFF2P51816 1311 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 STXBP3O00186 592 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 CCNT1O60563 726 aaKnown RBP18.1■□□□□ 0.49
TSKU-205ENST00000612930 BIRC2Q13490 618 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 KANSL2Q9H9L4 492 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 COL4A3BPQ9Y5P4 624 aa18.1■□□□□ 0.49
TSKU-205ENST00000612930 SMNDC1O75940 238 aaKnown RBP eCLIP18.09■□□□□ 0.49
TSKU-205ENST00000612930 BRD2P25440 801 aaKnown RBP18.09■□□□□ 0.49
TSKU-205ENST00000612930 MMP13P45452 471 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 EIF3BP55884 814 aaKnown RBP18.09■□□□□ 0.49
TSKU-205ENST00000612930 HEATR3Q7Z4Q2 680 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 ATP8B4Q8TF62 1192 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 SELENOSQ9BQE4 189 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 SLITRK6Q9H5Y7 841 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 NOP53Q9NZM5 478 aaKnown RBP18.09■□□□□ 0.49
TSKU-205ENST00000612930 ASAP1Q9ULH1 1129 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 CYTH3O43739 400 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 DIAPH2O60879 1101 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 CYP2D6P10635 497 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 NQO1P15559 274 aaKnown RBP18.09■□□□□ 0.49
TSKU-205ENST00000612930 SARNPP82979 210 aaKnown RBP18.09■□□□□ 0.49
TSKU-205ENST00000612930 POU5F1Q01860 360 aaKnown RBP18.09■□□□□ 0.49
TSKU-205ENST00000612930 ASIC2Q16515 512 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 RASGEF1CQ8N431 466 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 CALML4Q96GE6 196 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 PNMA5Q96PV4 448 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 TRIM51Q9BSJ1 452 aa18.09■□□□□ 0.49
TSKU-205ENST00000612930 NUP98P52948 1817 aa18.08■□□□□ 0.49
TSKU-205ENST00000612930 MIS18BP1Q6P0N0 1132 aa18.08■□□□□ 0.49
TSKU-205ENST00000612930 FAM114A2Q9NRY5 505 aa18.08■□□□□ 0.49
TSKU-205ENST00000612930 SLIT2O94813 1529 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 COL1A1P02452 1464 aaPredicted RBP18.08■□□□□ 0.48
TSKU-205ENST00000612930 PEX19P40855 299 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 ALDH5A1P51649 535 aaPredicted RBP18.08■□□□□ 0.48
TSKU-205ENST00000612930 NCALDP61601 193 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 PTK2Q05397 1052 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 ZCWPW2Q504Y3 356 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 CCDC26Q8TAB7 109 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 TSG101Q99816 390 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 TRIM31Q9BZY9 425 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 BARHL2Q9NY43 387 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 SLC5A4Q9NY91 659 aa18.08■□□□□ 0.48
TSKU-205ENST00000612930 TSPY2A6NKD2 308 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 UBOX5O94941 541 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 RARAP10276 462 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 CAPRIN2Q6IMN6 1127 aaKnown RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 GALNT17Q6IS24 598 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 TPCN2Q8NHX9 752 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 RNF217Q8TC41 542 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 PRCCQ92733 491 aaPredicted RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 GANQ9H2C0 597 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 RIC8AQ9NPQ8 531 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 SAMD15Q9P1V8 674 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 MAD2L2Q9UI95 211 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 STARD3NLO95772 234 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 ICA1Q05084 483 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 ZNF571Q7Z3V5 609 aaPredicted RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 HOOK3Q86VS8 718 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 DZIP3Q86Y13 1208 aaKnown RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 LARP4BQ92615 738 aaKnown RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 FMO2Q99518 471 aa18.07■□□□□ 0.48
TSKU-205ENST00000612930 PRMT1Q99873 361 aaKnown RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 UTP11Q9Y3A2 253 aaKnown RBP18.07■□□□□ 0.48
TSKU-205ENST00000612930 TRAF5O00463 557 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 IFI35P80217 286 aaPredicted RBP18.06■□□□□ 0.48
TSKU-205ENST00000612930 SLMAPQ14BN4 828 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 SPDYCQ5MJ68 293 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 SPICE1Q8N0Z3 855 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 PROM2Q8N271 834 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 SPATS2LQ9NUQ6 558 aaKnown RBP18.06■□□□□ 0.48
TSKU-205ENST00000612930 NR2E1Q9Y466 385 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 FKBP3Q00688 224 aaKnown RBP18.06■□□□□ 0.48
TSKU-205ENST00000612930 IRF2BP2Q7Z5L9 587 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 SAAL1Q96ER3 474 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 PGM2Q96G03 612 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 IL17RBQ9NRM6 502 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 GGT7Q9UJ14 662 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 A8MUI8 341 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 NUDT17P0C025 328 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
TSKU-205ENST00000612930 GYG1P46976 350 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 GRM4Q14833 912 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 RNF25Q96BH1 459 aaPredicted RBP18.06■□□□□ 0.48
TSKU-205ENST00000612930 CCDC134Q9H6E4 229 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 DCP1AQ9NPI6 582 aaPredicted RBP18.06■□□□□ 0.48
TSKU-205ENST00000612930 INTS9Q9NV88 658 aaKnown RBP18.06■□□□□ 0.48
TSKU-205ENST00000612930 TMOD3Q9NYL9 352 aa18.06■□□□□ 0.48
TSKU-205ENST00000612930 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
TSKU-205ENST00000612930 TLDC2A0PJX2 215 aa18.05■□□□□ 0.48
TSKU-205ENST00000612930 WTIPA6NIX2 430 aaPredicted RBP18.05■□□□□ 0.48
TSKU-205ENST00000612930 VIMP08670 466 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms