RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 NAB2Q15742 525 aa15.41■□□□□ 0.06
COL6A1-207ENST00000612273 ASPRV1Q53RT3 343 aa15.41■□□□□ 0.06
COL6A1-207ENST00000612273 ALKBH5Q6P6C2 394 aaKnown RBP15.41■□□□□ 0.06
COL6A1-207ENST00000612273 TADA2BQ86TJ2 420 aa15.41■□□□□ 0.06
COL6A1-207ENST00000612273 PPM1EQ8WY54 764 aa15.41■□□□□ 0.06
COL6A1-207ENST00000612273 PKD2L1Q9P0L9 805 aa15.41■□□□□ 0.06
COL6A1-207ENST00000612273 AJAP1Q9UKB5 411 aaPredicted RBP15.41■□□□□ 0.06
COL6A1-207ENST00000612273 IRS2Q9Y4H2 1338 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 SERPINB2P05120 415 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 ZNF76P36508 570 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 PDIA5Q14554 519 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 EXOC3L4Q17RC7 722 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 TRIM59Q8IWR1 403 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 GRIN2DO15399 1336 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 E7EVH7 732 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 ZBTB5O15062 677 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 RPS6KA5O75582 802 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 FLT3P36888 993 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 TMEM119Q4V9L6 283 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 ZCWPW2Q504Y3 356 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 DAAM2Q86T65 1068 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 CATSPER3Q86XQ3 398 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 CERS5Q8N5B7 392 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 REEP2Q9BRK0 252 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 ROBO1Q9Y6N7 1651 aa15.4■□□□□ 0.06
COL6A1-207ENST00000612273 ABCA3Q99758 1704 aa15.39■□□□□ 0.06
COL6A1-207ENST00000612273 SSU72P8A0A1W2PR75 194 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 UCHL3P15374 230 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 TMOD1P28289 359 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 POLD1P28340 1107 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 ZC2HC1CQ53FD0 456 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-207ENST00000612273 ANO3Q9BYT9 981 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 GOPCQ9HD26 462 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 CAPN7Q9Y6W3 813 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 CNTNAP4Q9C0A0 1308 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 AKAP3O75969 853 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 ERVK-9P63128 1117 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 ZNF211Q13398 564 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-207ENST00000612273 CTTNQ14247 550 aaKnown RBP15.39■□□□□ 0.05
COL6A1-207ENST00000612273 ARHGAP44Q17R89 818 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 KAT2BQ92831 832 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 P2RX7Q99572 595 aaKnown RBP15.39■□□□□ 0.05
COL6A1-207ENST00000612273 SH2D3AQ9BRG2 576 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 KRIT1O00522 736 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 DAPK3O43293 454 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 XRCC5P13010 732 aaKnown RBP15.39■□□□□ 0.05
COL6A1-207ENST00000612273 NR1D1P20393 614 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 INPP5BP32019 993 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 PEX26Q7Z412 305 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 OSGEPQ9NPF4 335 aa15.39■□□□□ 0.05
COL6A1-207ENST00000612273 ROBO3Q96MS0 1386 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 TMEM110-MUSTN1A8MSY1 372 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 GTF2A1P52655 376 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-207ENST00000612273 RBM46Q8TBY0 533 aaKnown RBP15.38■□□□□ 0.05
COL6A1-207ENST00000612273 ZC3H12CQ9C0D7 883 aaKnown RBP15.38■□□□□ 0.05
COL6A1-207ENST00000612273 DHX36Q9H2U1 1008 aaKnown RBP15.38■□□□□ 0.05
COL6A1-207ENST00000612273 MYO1FO00160 1098 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 LRRN2O75325 713 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
COL6A1-207ENST00000612273 CYP2J2P51589 502 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 IFT88Q13099 833 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 CDC37Q16543 378 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-207ENST00000612273 NEUROG2Q9H2A3 272 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 GCNT4Q9P109 453 aa15.38■□□□□ 0.05
COL6A1-207ENST00000612273 ESYT2A0FGR8 921 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 TLDC2A0PJX2 215 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 GOLGA6L10A6NI86 522 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 PJA2O43164 708 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 SART1O43290 800 aaKnown RBP15.37■□□□□ 0.05
COL6A1-207ENST00000612273 KIAA0754O94854 1291 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 LCA5LO95447 670 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 PRLRP16471 622 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 NMT1P30419 496 aaKnown RBP15.37■□□□□ 0.05
COL6A1-207ENST00000612273 CTNNA1P35221 906 aaKnown RBP15.37■□□□□ 0.05
COL6A1-207ENST00000612273 PSMD2Q13200 908 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 SEPT2Q15019 361 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 MEI1Q5TIA1 1274 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 GLYCTKQ8IVS8 523 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 TPH2Q8IWU9 490 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 RNF10Q8N5U6 811 aaKnown RBP15.37■□□□□ 0.05
COL6A1-207ENST00000612273 METTL13Q8N6R0 699 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 USP38Q8NB14 1042 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 INPP4AQ96PE3 977 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-207ENST00000612273 LRRC27Q9C0I9 530 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 LRRC4BQ9NT99 713 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 DNM3Q9UQ16 869 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 LSP1P33241 339 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 SHMT1P34896 483 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 USP8P40818 1118 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 TNNC1P63316 161 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 COG2Q14746 738 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 OTUD6BQ8N6M0 293 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 KCTD10Q9H3F6 313 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 NR2E1Q9Y466 385 aa15.37■□□□□ 0.05
COL6A1-207ENST00000612273 TTI1O43156 1089 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms