RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 HERC4Q5GLZ8 1057 aaPredicted RBP18.71■□□□□ 0.58
EWSR1-221ENST00000610553 MFSD14BQ5SR56 506 aa18.71■□□□□ 0.58
EWSR1-221ENST00000610553 POTEBQ6S5H4 581 aa18.71■□□□□ 0.58
EWSR1-221ENST00000610553 IRF2BP2Q7Z5L9 587 aa18.71■□□□□ 0.58
EWSR1-221ENST00000610553 SPATS2Q86XZ4 545 aaKnown RBP18.71■□□□□ 0.58
EWSR1-221ENST00000610553 LRRC57Q8N9N7 239 aa18.71■□□□□ 0.58
EWSR1-221ENST00000610553 POLD4Q9HCU8 107 aa18.71■□□□□ 0.58
EWSR1-221ENST00000610553 KCNK3O14649 394 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 KIF4AO95239 1232 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 ITGB3BPQ13352 177 aaPredicted RBP18.7■□□□□ 0.58
EWSR1-221ENST00000610553 RPS6KA1Q15418 735 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 NAA35Q5VZE5 725 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 KLHL7Q8IXQ5 586 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 TAF4BQ92750 862 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
EWSR1-221ENST00000610553 PLCB1Q9NQ66 1216 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
EWSR1-221ENST00000610553 PLAAQ9Y263 795 aa18.7■□□□□ 0.58
EWSR1-221ENST00000610553 BHMG1C9JSJ3 638 aaPredicted RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 MARCH6O60337 910 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 UFL1O94874 794 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 ZBTB48P10074 688 aaPredicted RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 MRPL12P52815 198 aaKnown RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 ZNF571Q7Z3V5 609 aaPredicted RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 SLF2Q8IX21 1173 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 ACTRT1Q8TDG2 376 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 ATF5Q9Y2D1 282 aaPredicted RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 RTCBQ9Y3I0 505 aaKnown RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 CETN3O15182 167 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 SLC26A4O43511 780 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 NR2F2P24468 414 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 GTF2A1P52655 376 aaPredicted RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 CUL1Q13616 776 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 PTGISQ16647 500 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 DPP8Q6V1X1 898 aaPredicted RBP18.69■□□□□ 0.58
EWSR1-221ENST00000610553 SEPT12Q8IYM1 358 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 KCNMB3Q9NPA1 279 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 SWAP70Q9UH65 585 aa18.69■□□□□ 0.58
EWSR1-221ENST00000610553 TTLL1O95922 423 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 ACTN1P12814 892 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 UCHL3P15374 230 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 MDH1P40925 334 aaKnown RBP18.68■□□□□ 0.58
EWSR1-221ENST00000610553 SLC12A3P55017 1021 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 ARSHQ5FYA8 562 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 LRIG3Q6UXM1 1119 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 PBKQ96KB5 322 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 CALR3Q96L12 384 aaKnown RBP18.68■□□□□ 0.58
EWSR1-221ENST00000610553 TMBIM4Q9HC24 238 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 ATP8B3O60423 1300 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 SRRM3A6NNA2 597 aaPredicted RBP18.68■□□□□ 0.58
EWSR1-221ENST00000610553 ZBTB5O15062 677 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 MEFVO15553 781 aaPredicted RBP18.68■□□□□ 0.58
EWSR1-221ENST00000610553 CASP5P51878 434 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 CEP85LQ5SZL2 805 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 TTBK2Q6IQ55 1244 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 NAP1L4Q99733 375 aaKnown RBP18.68■□□□□ 0.58
EWSR1-221ENST00000610553 GOLPH3Q9H4A6 298 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 PSTPIP2Q9H939 334 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 NAGPAQ9UK23 515 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 NENFQ9UMX5 172 aa18.68■□□□□ 0.58
EWSR1-221ENST00000610553 BZW2Q9Y6E2 419 aaKnown RBP18.68■□□□□ 0.58
EWSR1-221ENST00000610553 SLC9A1P19634 815 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 GUCY2CP25092 1073 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 KCNV1Q6PIU1 500 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 MAATS1Q7Z4T9 603 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 FRMD5Q7Z6J6 570 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 YTHDF3Q7Z739 585 aaKnown RBP18.67■□□□□ 0.58
EWSR1-221ENST00000610553 CNPY4Q8N129 248 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 ZNF473Q8WTR7 871 aaKnown RBP18.67■□□□□ 0.58
EWSR1-221ENST00000610553 TRAF3IP3Q9Y228 551 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 DAGLAQ9Y4D2 1042 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 H0YGN5 161 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 HSD17B3P37058 310 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 PRKCIP41743 596 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 HLTFQ14527 1009 aaKnown RBP eCLIP18.67■□□□□ 0.58
EWSR1-221ENST00000610553 UAP1Q16222 522 aaPredicted RBP18.67■□□□□ 0.58
EWSR1-221ENST00000610553 IFI16Q16666 785 aaKnown RBP18.67■□□□□ 0.58
EWSR1-221ENST00000610553 FBXW10Q5XX13 1052 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 MYCBPAPQ8TBZ2 947 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 SPAG5Q96R06 1193 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 NFS1Q9Y697 457 aa18.67■□□□□ 0.58
EWSR1-221ENST00000610553 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 MED24O75448 989 aa18.66■□□□□ 0.58
EWSR1-221ENST00000610553 FSBPO95073 299 aa18.66■□□□□ 0.58
EWSR1-221ENST00000610553 ATP2B4P23634 1241 aa18.66■□□□□ 0.58
EWSR1-221ENST00000610553 GPATCH4Q5T3I0 446 aaKnown RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 CNBD1Q8NA66 436 aa18.66■□□□□ 0.58
EWSR1-221ENST00000610553 PRPF38AQ8NAV1 312 aaKnown RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 RBM46Q8TBY0 533 aaKnown RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
EWSR1-221ENST00000610553 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 ARMCX3Q9UH62 379 aaPredicted RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 TRPC5Q9UL62 973 aaPredicted RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 USP17L10C9JJH3 530 aa18.66■□□□□ 0.58
EWSR1-221ENST00000610553 PGRMC1O00264 195 aaKnown RBP18.66■□□□□ 0.58
EWSR1-221ENST00000610553 KIAA0754O94854 1291 aa18.66■□□□□ 0.58
EWSR1-221ENST00000610553 AFPP02771 609 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms