RNA–Protein interactions for RNA: ENST00000610293.1

U1.23-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.23-201ENST00000610293 ERCC3P19447 782 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 MCM3P25205 808 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 KLRC1P26715 233 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 RPA1P27694 616 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 GGCXP38435 758 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 MAGEA1P43355 309 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CASP4P49662 377 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SCNN1DP51172 638 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 USP11P51784 963 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 EPHB4P54760 987 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 MCCD1P59942 119 aaPredicted RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 POLR2FP61218 127 aaKnown RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 SKOR1P84550 965 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 ARHGAP4P98171 946 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 HDLBPQ00341 1268 aaKnown RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 FKBP3Q00688 224 aaKnown RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 GFPT1Q06210 699 aaPredicted RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 SLC20A2Q08357 652 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 GIT2Q14161 759 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SPA17Q15506 151 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SLC15A2Q16348 729 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SLC18A3Q16572 532 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CCDC96Q2M329 555 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 TSR1Q2NL82 804 aaKnown RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 MAP9Q49MG5 647 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CCDC40Q4G0X9 1142 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 KIAA1755Q5JYT7 1200 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 EMC10Q5UCC4 262 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SFMBT2Q5VUG0 894 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 EMBQ6PCB8 327 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 PPP4R3CPQ6ZMV5 832 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 ZNF571Q7Z3V5 609 aaPredicted RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 IRF2BP2Q7Z5L9 587 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 FRMD5Q7Z6J6 570 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SLFN11Q7Z7L1 901 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SRLQ86TD4 932 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SFR1Q86XK3 245 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CATSPER3Q86XQ3 398 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 NELFCDQ8IXH7 590 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CCDC65Q8IXS2 484 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SEPT12Q8IYM1 358 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 RNF10Q8N5U6 811 aaKnown RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 SYT2Q8N9I0 419 aaPredicted RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 GMCL1P1Q8NEA9 526 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 LNX1Q8TBB1 728 aaPredicted RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 AFAP1L1Q8TED9 768 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CASKIN2Q8WXE0 1202 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 TEKT1Q969V4 418 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SLC35C1Q96A29 364 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 ARL8AQ96BM9 186 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 ZBTB9Q96C00 473 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 GMCL1Q96IK5 515 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 MS4A14Q96JA4 679 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CDK5RAP3Q96JB5 506 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CCDC17Q96LX7 622 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 CCDC42Q96M95 316 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 ZDHHC15Q96MV8 337 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 UIMC1Q96RL1 719 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 NAP1L4Q99733 375 aaKnown RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 TSG101Q99816 390 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 REEP2Q9BRK0 252 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 POLR3CQ9BUI4 534 aaPredicted RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 WDR18Q9BV38 432 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 RUSC1Q9BVN2 902 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 MRIQ9BWK5 157 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 STRA6Q9BX79 667 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 RAB34Q9BZG1 259 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 LRRC27Q9C0I9 530 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 GPR88Q9GZN0 384 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 GLT8D2Q9H1C3 349 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 NUCKS1Q9H1E3 243 aaKnown RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 MMRN2Q9H8L6 949 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 PSTPIP2Q9H939 334 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 KANSL2Q9H9L4 492 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 NLRC4Q9NPP4 1024 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 KCNQ5Q9NR82 932 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 USP40Q9NVE5 1235 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 TBC1D7Q9P0N9 293 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 TSKSQ9UJT2 592 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 FBXL5Q9UKA1 691 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 HDAC9Q9UKV0 1011 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 KIAA1024Q9UPX6 916 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 STXBP5LQ9Y2K9 1186 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 SCN1AP35498 2009 aa3.56□□□□□ -1.84
U1.23-201ENST00000610293 TRIP12Q14669 1992 aaPredicted RBP3.56□□□□□ -1.84
U1.23-201ENST00000610293 CNTNAP1P78357 1384 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 DOCK3Q8IZD9 2030 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 UBE4BO95155 1302 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 RPTORQ8N122 1335 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 A0A0A6YYK5 440 aaPredicted RBP3.55□□□□□ -1.84
U1.23-201ENST00000610293 A0A1W2PRG0 241 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 GTPBP10A4D1E9 387 aaKnown RBP3.55□□□□□ -1.84
U1.23-201ENST00000610293 ZNF233A6NK53 670 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 F8W031 263 aaPredicted RBP3.55□□□□□ -1.84
U1.23-201ENST00000610293 H0YGN5 161 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 PIK3CDO00329 1044 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 TRAF5O00463 557 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 DDX3XO00571 662 aaKnown RBP eCLIP3.55□□□□□ -1.84
U1.23-201ENST00000610293 PDXKO00764 312 aa3.55□□□□□ -1.84
U1.23-201ENST00000610293 EIF3DO15371 548 aaKnown RBP eCLIP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms