RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 IFIH1Q9BYX4 1025 aaKnown RBP18.29■□□□□ 0.52
SGMS1-209ENST00000609445 SLC9A2Q9UBY0 812 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 TUBE1Q9UJT0 475 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 MYO7AQ13402 2215 aa18.29■□□□□ 0.52
SGMS1-209ENST00000609445 ADAMTS3O15072 1205 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
SGMS1-209ENST00000609445 CLK2P49760 499 aaKnown RBP18.28■□□□□ 0.52
SGMS1-209ENST00000609445 FGD1P98174 961 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 ITGB3BPQ13352 177 aaPredicted RBP18.28■□□□□ 0.52
SGMS1-209ENST00000609445 Q6ZUG5 572 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 FBXO22Q8NEZ5 403 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 DNAJB3Q8WWF6 145 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 TOP1MTQ969P6 601 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 JAKMIP1Q96N16 626 aaKnown RBP18.28■□□□□ 0.52
SGMS1-209ENST00000609445 YME1L1Q96TA2 773 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
SGMS1-209ENST00000609445 NFASCO94856 1347 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 MBLAC1A4D2B0 266 aaPredicted RBP18.27■□□□□ 0.52
SGMS1-209ENST00000609445 hCG_1984214I3L0E3 225 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 HMGB1P09429 215 aaKnown RBP18.27■□□□□ 0.52
SGMS1-209ENST00000609445 INSRRP14616 1297 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 SREBF1P36956 1147 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 METAP2P50579 478 aaKnown RBP eCLIP18.27■□□□□ 0.52
SGMS1-209ENST00000609445 ACTR2P61160 394 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 LPIN1Q14693 890 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 CEP55Q53EZ4 464 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 JAKMIP3Q5VZ66 844 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 TAF2Q6P1X5 1199 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 RPAINQ86UA6 219 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 ZNF713Q8N859 430 aaPredicted RBP18.27■□□□□ 0.52
SGMS1-209ENST00000609445 TRAPPC12Q8WVT3 735 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 BRF1Q92994 677 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 SDF4Q9BRK5 362 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 AGO4Q9HCK5 861 aaKnown RBP18.27■□□□□ 0.52
SGMS1-209ENST00000609445 COG5Q9UP83 839 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 CDY2AQ9Y6F7 541 aa18.27■□□□□ 0.52
SGMS1-209ENST00000609445 DDX39AO00148 427 aaKnown RBP18.26■□□□□ 0.51
SGMS1-209ENST00000609445 MEIS1O00470 390 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 HSPA4P34932 840 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 RCAN1P53805 252 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 AP3B2Q13367 1082 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 PLCB4Q15147 1175 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 PFKFB3Q16875 520 aaPredicted RBP18.26■□□□□ 0.51
SGMS1-209ENST00000609445 AAK1Q2M2I8 961 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 RSPH3Q86UC2 560 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 APBB2Q92870 758 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 HLA-CQ95604 372 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 FAM49AQ9H0Q0 323 aaPredicted RBP18.26■□□□□ 0.51
SGMS1-209ENST00000609445 AZI2Q9H6S1 392 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 LMCD1Q9NZU5 365 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 TRPC6Q9Y210 931 aa18.26■□□□□ 0.51
SGMS1-209ENST00000609445 SCG2P13521 617 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 ZNF76P36508 570 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 EPC2Q52LR7 807 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 FBXO47Q5MNV8 452 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 BLOC1S2Q6QNY1 142 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 TEX2Q8IWB9 1127 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 TTC3P53804 2025 aa18.25■□□□□ 0.51
SGMS1-209ENST00000609445 RALGAPA2Q2PPJ7 1873 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 EVPLQ92817 2033 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 RRN3P2A6NIE6 340 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 FAM86B1E9PN63 330 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 PPFIA3O75145 1194 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 CCNE2O96020 404 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 FAM86B2P0C5J1 330 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 STAT5BP51692 787 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 MRPS6P82932 125 aaKnown RBP18.24■□□□□ 0.51
SGMS1-209ENST00000609445 TMEM62Q0P6H9 643 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 PKN1Q16512 942 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 PHKBQ93100 1093 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 GLT8D2Q9H1C3 349 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 AGO3Q9H9G7 860 aaKnown RBP18.24■□□□□ 0.51
SGMS1-209ENST00000609445 COL4A6Q14031 1691 aa18.24■□□□□ 0.51
SGMS1-209ENST00000609445 ATG2AQ2TAZ0 1938 aa18.23■□□□□ 0.51
SGMS1-209ENST00000609445 NID2Q14112 1375 aa18.23■□□□□ 0.51
SGMS1-209ENST00000609445 CCDC196A0A1B0GTZ2 297 aa18.23■□□□□ 0.51
SGMS1-209ENST00000609445 ATG7O95352 703 aa18.23■□□□□ 0.51
SGMS1-209ENST00000609445 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
SGMS1-209ENST00000609445 CD52P31358 61 aa18.23■□□□□ 0.51
SGMS1-209ENST00000609445 PLPPR4Q7Z2D5 763 aa18.23■□□□□ 0.51
SGMS1-209ENST00000609445 MYH9P35579 1960 aaKnown RBP18.22■□□□□ 0.51
SGMS1-209ENST00000609445 IGLV3-22A0A075B6J6 115 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 ENPP3O14638 875 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 GPM6BQ13491 265 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 TSHZ1Q6ZSZ6 1077 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 NIPA1Q7RTP0 329 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 TMEM192Q8IY95 271 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 RASGRP4Q8TDF6 673 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 CRYGNQ8WXF5 182 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 SAMD11Q96NU1 681 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 ZMYND12Q9H0C1 365 aa18.22■□□□□ 0.51
SGMS1-209ENST00000609445 WDR81Q562E7 1941 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 IGKV6D-21A0A0A0MT36 114 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 ESYT2A0FGR8 921 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 POTEB3A0JP26 581 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 BACH1O14867 736 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms