RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 SETQ01105 290 aaPredicted RBP16.08■□□□□ 0.16
CTCFL-219ENST00000608720 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
CTCFL-219ENST00000608720 BCAS4Q8TDM0 211 aa16.08■□□□□ 0.16
CTCFL-219ENST00000608720 GJA10Q969M2 543 aa16.08■□□□□ 0.16
CTCFL-219ENST00000608720 INPP4AQ96PE3 977 aaPredicted RBP16.08■□□□□ 0.16
CTCFL-219ENST00000608720 SUFUQ9UMX1 484 aa16.08■□□□□ 0.16
CTCFL-219ENST00000608720 BZW2Q9Y6E2 419 aaKnown RBP16.08■□□□□ 0.16
CTCFL-219ENST00000608720 PITPNM2Q9BZ72 1349 aa16.08■□□□□ 0.16
CTCFL-219ENST00000608720 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 CCT5P48643 541 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 KCNH2Q12809 1159 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 CD302Q8IX05 232 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 FAM133AQ8N9E0 248 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 WHAMMQ8TF30 809 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 IFT81Q8WYA0 676 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.07■□□□□ 0.16
CTCFL-219ENST00000608720 TAF4BQ92750 862 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 CCDC43Q96MW1 224 aaKnown RBP16.07■□□□□ 0.16
CTCFL-219ENST00000608720 KRT12Q99456 494 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 SERPINB13Q9UIV8 391 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 SUGT1Q9Y2Z0 365 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 KRT18P05783 430 aaKnown RBP16.07■□□□□ 0.16
CTCFL-219ENST00000608720 ARID5AQ03989 594 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
CTCFL-219ENST00000608720 KCNMB3Q9NPA1 279 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 PLCB1Q9NQ66 1216 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 POLLQ9UGP5 575 aa16.07■□□□□ 0.16
CTCFL-219ENST00000608720 CYP3A7-CYP3A51PA0A087WV96 503 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 NPHP3-ACAD11A0A0J9YXS1 232 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 POTECB2RU33 542 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 CYP3A7P24462 503 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 INPP5BP32019 993 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 SLC16A2P36021 539 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 LIG3P49916 1009 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 RPS6KA1Q15418 735 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 SKIDA1Q1XH10 827 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 FRMD5Q7Z6J6 570 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 CLEC10AQ8IUN9 316 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 SLFN12Q8IYM2 578 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 EIF1ADQ8N9N8 165 aaKnown RBP16.06■□□□□ 0.16
CTCFL-219ENST00000608720 USP38Q8NB14 1042 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 GOLGB1Q14789 3259 aaKnown RBP16.06■□□□□ 0.16
CTCFL-219ENST00000608720 FAM153BP0C7A2 387 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 DNA2P51530 1060 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 SLC12A3P55017 1021 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 FAM153CQ494X1 144 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 EMC10Q5UCC4 262 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 C1orf131Q8NDD1 294 aaKnown RBP16.06■□□□□ 0.16
CTCFL-219ENST00000608720 CASKIN2Q8WXE0 1202 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 PBKQ96KB5 322 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 MBOAT7Q96N66 472 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 DHX36Q9H2U1 1008 aaKnown RBP16.06■□□□□ 0.16
CTCFL-219ENST00000608720 FAM153AQ9UHL3 310 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 TMEM59LQ9UK28 342 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 HDAC9Q9UKV0 1011 aa16.06■□□□□ 0.16
CTCFL-219ENST00000608720 FSBPO95073 299 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 NR2F2P24468 414 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 GTF2IP78347 998 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 MOXD1Q6UVY6 613 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 IRF2BP2Q7Z5L9 587 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 CEP120Q8N960 986 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 CABS1Q96KC9 395 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 PACSIN1Q9BY11 444 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 KANSL2Q9H9L4 492 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 ARMCX3Q9UH62 379 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-219ENST00000608720 TRAF3IP3Q9Y228 551 aa16.05■□□□□ 0.16
CTCFL-219ENST00000608720 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 MYBP10242 640 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ANXA13P27216 316 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 SHMT1P34896 483 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ENOX2Q16206 610 aaKnown RBP16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ARSHQ5FYA8 562 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 KDM7AQ6ZMT4 941 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 B4GALNT4Q76KP1 1039 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 SPAG5Q96R06 1193 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 EHD4Q9H223 541 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ZHX3Q9H4I2 956 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
CTCFL-219ENST00000608720 NHSQ6T4R5 1651 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ZNF233A6NK53 670 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 MED24O75448 989 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 KRT14P02533 472 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
CTCFL-219ENST00000608720 BRD2P25440 801 aaKnown RBP16.04■□□□□ 0.16
CTCFL-219ENST00000608720 PTK2Q05397 1052 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 KNOP1Q1ED39 458 aaKnown RBP16.04■□□□□ 0.16
CTCFL-219ENST00000608720 FAM196AQ6ZSG2 479 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ERMNQ8TAM6 284 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-219ENST00000608720 STK24Q9Y6E0 443 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms