RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SKAP1Q86WV1 359 aa15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 BANK1Q8NDB2 785 aa15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 KHSRPQ92945 711 aaKnown RBP eCLIP15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 ZBTB10Q96DT7 871 aa15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 PGBD1Q96JS3 809 aa15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 TCEANC2Q96MN5 208 aa15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 JPH1Q9HDC5 661 aaPredicted RBP15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 CD320Q9NPF0 282 aa15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 RIC8AQ9NPQ8 531 aa15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 RBM28Q9NW13 759 aaKnown RBP15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 V9GY48 417 aaPredicted RBP15.31■□□□□ 0.04
POLR2J3-219ENST00000608621 ARP10275 920 aa15.3■□□□□ 0.04
POLR2J3-219ENST00000608621 FUT2Q10981 343 aa15.3■□□□□ 0.04
POLR2J3-219ENST00000608621 DHX32Q7L7V1 743 aaKnown RBP15.3■□□□□ 0.04
POLR2J3-219ENST00000608621 CNTNAP5Q8WYK1 1306 aa15.3■□□□□ 0.04
POLR2J3-219ENST00000608621 LRFN3Q9BTN0 628 aa15.3■□□□□ 0.04
POLR2J3-219ENST00000608621 FAM49AQ9H0Q0 323 aaPredicted RBP15.3■□□□□ 0.04
POLR2J3-219ENST00000608621 AZI2Q9H6S1 392 aa15.3■□□□□ 0.04
POLR2J3-219ENST00000608621 MYO7AQ13402 2215 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 SMCO2A6NFE2 343 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 ZBTB43O43298 467 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 FOSP01100 380 aaPredicted RBP15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 IL9P15248 144 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 CD52P31358 61 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 CTNNB1P35222 781 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 BMPR1AP36894 532 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 ACTR2P61160 394 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 MRPS6P82932 125 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 PLCB4Q15147 1175 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 RTN1Q16799 776 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 ADCK5Q3MIX3 580 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 TIGD5Q53EQ6 642 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 BMP2KLQ5H9B9 411 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 TCEAL5Q5H9L2 206 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 RTN4RL1Q86UN2 441 aaPredicted RBP15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 FAM178BQ8IXR5 827 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 RASEFQ8IZ41 740 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 TNPO1Q92973 898 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 SDF4Q9BRK5 362 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 AGO3Q9H9G7 860 aaKnown RBP15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 TMEM260Q9NX78 707 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 TRPC6Q9Y210 931 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 NLRC5Q86WI3 1866 aa15.29■□□□□ 0.04
POLR2J3-219ENST00000608621 NFASCO94856 1347 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 GRXCR2A6NFK2 248 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 RB1P06400 928 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 LINC00271P0C7V0 271 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 STAT5BP51692 787 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 ADCY7P51828 1080 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 TMEM62Q0P6H9 643 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 TSGA10IPQ3SY00 556 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 CEP55Q53EZ4 464 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 IER5Q5VY09 327 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 PTCRAQ6ISU1 281 aaPredicted RBP15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 EP400NLQ6ZTU2 488 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 PLPPR4Q7Z2D5 763 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 NEK9Q8TD19 979 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 TRAPPC12Q8WVT3 735 aa15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 ZNF689Q96CS4 500 aaPredicted RBP15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 NSUN3Q9H649 340 aaKnown RBP15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 AGO4Q9HCK5 861 aaKnown RBP15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
POLR2J3-219ENST00000608621 KLF18A0A0U1RQI7 1052 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 GOLGA8AA7E2F4 631 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 GOLGA8BA8MQT2 603 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 C5orf67F2Z3F1 127 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 STXBP3O00186 592 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 MEIS1O00470 390 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 GRM6O15303 877 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 ATG7O95352 703 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 RPLP2P05387 115 aaKnown RBP15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 CDC27P30260 824 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 ZNF76P36508 570 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 ITGB3BPQ13352 177 aaPredicted RBP15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 BTG3Q14201 252 aaPredicted RBP15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 TMEM31Q5JXX7 168 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 PPP1R18Q6NYC8 613 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 TEX2Q8IWB9 1127 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 GJD3Q8N144 294 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 PABPC5Q96DU9 382 aaKnown RBP15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 RC3H2Q9HBD1 1191 aaKnown RBP15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 BARHL2Q9NY43 387 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 RWDD3Q9Y3V2 267 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 PCDHA2Q9Y5H9 948 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 TRPV2Q9Y5S1 764 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 SQORQ9Y6N5 450 aa15.27■□□□□ 0.04
POLR2J3-219ENST00000608621 COL4A6Q14031 1691 aa15.27■□□□□ 0.03
POLR2J3-219ENST00000608621 TTC3P53804 2025 aa15.27■□□□□ 0.03
POLR2J3-219ENST00000608621 ADGRA3Q8IWK6 1321 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 POTEB3A0JP26 581 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 PI4K2BG5E9Z4 385 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 hCG_1984214I3L0E3 225 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 M0QZ92 97 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 DGKIO75912 1065 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 ADD1P35611 737 aaKnown RBP15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 SREBF1P36956 1147 aa15.26■□□□□ 0.03
POLR2J3-219ENST00000608621 CLK2P49760 499 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms