RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 IGLV3-22A0A075B6J6 115 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 IGFBP4P22692 258 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 SETQ01105 290 aaPredicted RBP20.6■□□□□ 0.89
CCDC12-208ENST00000603885 ADGRE1Q14246 886 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 CPLX2Q6PUV4 134 aaKnown RBP20.6■□□□□ 0.89
CCDC12-208ENST00000603885 RPAINQ86UA6 219 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 RSPH3Q86UC2 560 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 RASGRP4Q8TDF6 673 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 SEPT8Q92599 483 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 LARP6Q9BRS8 491 aaKnown RBP20.6■□□□□ 0.89
CCDC12-208ENST00000603885 SH3GLB2Q9NR46 395 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 TRPC6Q9Y210 931 aa20.6■□□□□ 0.89
CCDC12-208ENST00000603885 MBLAC1A4D2B0 266 aaPredicted RBP20.59■□□□□ 0.89
CCDC12-208ENST00000603885 RRN3P2A6NIE6 340 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 DDX39AO00148 427 aaKnown RBP20.59■□□□□ 0.89
CCDC12-208ENST00000603885 DLL1O00548 723 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 GJB5O95377 273 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 STAT5BP51692 787 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 IGBP1P78318 339 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 FAM26DQ5JW98 314 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 RUFY4Q6ZNE9 571 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 PLPPR4Q7Z2D5 763 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 TMCO2Q7Z6W1 182 aaPredicted RBP20.59■□□□□ 0.89
CCDC12-208ENST00000603885 TRANK1O15050 2925 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 CUL9Q8IWT3 2517 aa20.59■□□□□ 0.89
CCDC12-208ENST00000603885 IPO5O00410 1097 aaKnown RBP20.58■□□□□ 0.89
CCDC12-208ENST00000603885 ATG7O95352 703 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 DEXIO95424 95 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 AMHP03971 560 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 INSRRP14616 1297 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 SLC26A2P50443 739 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 NLRP5P59047 1200 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 TAP1Q03518 808 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 STK3Q13188 491 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 MARCH8Q5T0T0 291 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 USP38Q8NB14 1042 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 RAD9AQ99638 391 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 ZNF577Q9BSK1 485 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 CERS4Q9HA82 394 aa20.58■□□□□ 0.89
CCDC12-208ENST00000603885 MICAL3Q7RTP6 2002 aa20.58■□□□□ 0.88
CCDC12-208ENST00000603885 BACH1O14867 736 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 CCNE2O96020 404 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 RPLP2P05387 115 aaKnown RBP20.57■□□□□ 0.88
CCDC12-208ENST00000603885 ANAPC15P60006 121 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 PLCB4Q15147 1175 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 FAM160B1Q5W0V3 765 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.57■□□□□ 0.88
CCDC12-208ENST00000603885 PPM1EQ8WY54 764 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 APBB2Q92870 758 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 TBC1D22BQ9NU19 505 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 TCEAL9Q9UHQ7 104 aa20.57■□□□□ 0.88
CCDC12-208ENST00000603885 IGKV6D-21A0A0A0MT36 114 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 LCHNA4D1U4 455 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 RBAK-RBAKDNI3L0D1 243 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 DHX15O43143 795 aaKnown RBP20.56■□□□□ 0.88
CCDC12-208ENST00000603885 ARHGEF15O94989 841 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 CHRNA1P02708 482 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 CIITAP33076 1130 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 MKRN4PQ13434 485 aaPredicted RBP20.56■□□□□ 0.88
CCDC12-208ENST00000603885 PRR16Q569H4 304 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 MIS18BP1Q6P0N0 1132 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 FAM117BQ6P1L5 589 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 ABHD15Q6UXT9 468 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 MYOCDQ8IZQ8 938 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 DNAJB3Q8WWF6 145 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 ARNTL2Q8WYA1 636 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 IFIH1Q9BYX4 1025 aaKnown RBP20.56■□□□□ 0.88
CCDC12-208ENST00000603885 OSBPL7Q9BZF2 842 aa20.56■□□□□ 0.88
CCDC12-208ENST00000603885 POTEB3A0JP26 581 aa20.55■□□□□ 0.88
CCDC12-208ENST00000603885 EIF5BO60841 1220 aaKnown RBP20.55■□□□□ 0.88
CCDC12-208ENST00000603885 CDKL5O76039 1030 aa20.55■□□□□ 0.88
CCDC12-208ENST00000603885 POTEBQ6S5H4 581 aa20.55■□□□□ 0.88
CCDC12-208ENST00000603885 FAM177A1Q8N128 213 aaPredicted RBP20.55■□□□□ 0.88
CCDC12-208ENST00000603885 UIMC1Q96RL1 719 aa20.55■□□□□ 0.88
CCDC12-208ENST00000603885 C22orf23Q9BZE7 217 aa20.55■□□□□ 0.88
CCDC12-208ENST00000603885 FAM49AQ9H0Q0 323 aaPredicted RBP20.55■□□□□ 0.88
CCDC12-208ENST00000603885 PCDHA4Q9UN74 947 aa20.55■□□□□ 0.88
CCDC12-208ENST00000603885 GTPBP6O43824 516 aaPredicted RBP20.54■□□□□ 0.88
CCDC12-208ENST00000603885 GHRP10912 638 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 KRT76Q01546 638 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 MGAT3Q09327 533 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 CCDC85BQ15834 202 aaPredicted RBP20.54■□□□□ 0.88
CCDC12-208ENST00000603885 ZNF746Q6NUN9 644 aaPredicted RBP20.54■□□□□ 0.88
CCDC12-208ENST00000603885 CCDC60Q8IWA6 550 aaPredicted RBP20.54■□□□□ 0.88
CCDC12-208ENST00000603885 TRAPPC12Q8WVT3 735 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 SLKQ9H2G2 1235 aaPredicted RBP20.54■□□□□ 0.88
CCDC12-208ENST00000603885 ZNF302Q9NR11 478 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 INSL6Q9Y581 213 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 PCDHA2Q9Y5H9 948 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 CDY2AQ9Y6F7 541 aa20.54■□□□□ 0.88
CCDC12-208ENST00000603885 EPOPA6NHQ4 379 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 RFXAPO00287 272 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 HBP1O60381 514 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 USP11P51784 963 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 MRPS6P82932 125 aaKnown RBP20.53■□□□□ 0.88
CCDC12-208ENST00000603885 SCRN1Q12765 414 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 ANKRD1Q15327 319 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 IER5Q5VY09 327 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 GALNT17Q6IS24 598 aa20.53■□□□□ 0.88
CCDC12-208ENST00000603885 SWSAP1Q6NVH7 229 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms